Variant report

Variant rs334739
Chromosome Location chr1:61591640-61591641
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:61581400-61592000 Weak transcription Primary hematopoietic stem cells blood
2 chr1:61581400-61604600 Weak transcription Fetal Muscle Trunk muscle
3 chr1:61582400-61604800 Weak transcription Hela-S3 cervix
4 chr1:61584600-61597800 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:61585000-61597400 Weak transcription Ovary ovary
6 chr1:61586200-61597800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr1:61586400-61597000 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr1:61586600-61598200 Weak transcription Fetal Intestine Small intestine
9 chr1:61586800-61592200 Enhancers Brain Substantia Nigra brain
10 chr1:61586800-61597400 Weak transcription NHEK skin
11 chr1:61586800-61597800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr1:61587000-61597600 Weak transcription NHLF lung
13 chr1:61587000-61598400 Weak transcription NHDF-Ad bronchial
14 chr1:61587000-61606800 Weak transcription Fetal Intestine Large intestine
15 chr1:61587400-61591800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
16 chr1:61587600-61593800 Weak transcription Fetal Stomach stomach
17 chr1:61588200-61597400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr1:61588400-61596200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr1:61589200-61592000 Enhancers Colon Smooth Muscle Colon
20 chr1:61589600-61591800 Enhancers Rectal Smooth Muscle rectum
21 chr1:61589800-61591800 Enhancers Fetal Muscle Leg muscle
22 chr1:61590000-61597600 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr1:61590200-61597000 Weak transcription HepG2 liver
24 chr1:61590400-61591800 Enhancers Stomach Smooth Muscle stomach
25 chr1:61590400-61592000 Enhancers Breast Myoepithelial Primary Cells Breast
26 chr1:61590600-61596000 Weak transcription A549 lung
27 chr1:61590600-61597000 Weak transcription Right Ventricle heart
28 chr1:61591000-61591800 Enhancers Adipose Nuclei Adipose
29 chr1:61591000-61591800 Flanking Active TSS Fetal Heart heart
30 chr1:61591000-61595800 Weak transcription Fetal Brain Female brain
31 chr1:61591000-61596200 Weak transcription Fetal Lung lung
32 chr1:61591000-61597400 Weak transcription Aorta Aorta
33 chr1:61591200-61591800 Enhancers Brain Germinal Matrix brain
34 chr1:61591200-61592400 Enhancers Brain Cingulate Gyrus brain
35 chr1:61591200-61592600 Weak transcription Left Ventricle heart
36 chr1:61591200-61593000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr1:61591400-61591800 Enhancers Liver Liver
38 chr1:61591400-61591800 Flanking Active TSS Skeletal Muscle Male skeletal muscle
39 chr1:61591400-61592000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
40 chr1:61591400-61592200 Enhancers Brain Hippocampus Middle brain
41 chr1:61591400-61592200 Enhancers Psoas Muscle Psoas
42 chr1:61591400-61592400 Enhancers Brain Anterior Caudate brain
43 chr1:61591600-61591800 Flanking Active TSS Brain Inferior Temporal Lobe brain
44 chr1:61591600-61592000 Weak transcription Fetal Brain Male brain
45 chr1:61591600-61593400 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr1:61591600-61597000 Weak transcription Brain Angular Gyrus brain
47 chr1:61591600-61597800 Weak transcription Right Atrium heart

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