The 2.0 version of rSNPBase

Variant report

Variant rs334731
Chromosome Location chr1:61602342-61602343
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:61581400-61604600 Weak transcription Fetal Muscle Trunk muscle
2 chr1:61582400-61604800 Weak transcription Hela-S3 cervix
3 chr1:61587000-61606800 Weak transcription Fetal Intestine Large intestine
4 chr1:61591800-61604600 Weak transcription Fetal Muscle Leg muscle
5 chr1:61594200-61603800 Weak transcription Left Ventricle heart
6 chr1:61598000-61604600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:61598200-61604000 Weak transcription NHEK skin
8 chr1:61598200-61604800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr1:61598400-61604600 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr1:61598400-61604800 Weak transcription Adipose Nuclei Adipose
11 chr1:61598600-61604800 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr1:61598600-61604800 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr1:61598600-61604800 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr1:61598600-61605000 Weak transcription Brain Angular Gyrus brain
15 chr1:61598600-61605000 Weak transcription NHDF-Ad bronchial
16 chr1:61598600-61605200 Weak transcription Right Ventricle heart
17 chr1:61598800-61604800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr1:61598800-61604800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr1:61598800-61605000 Weak transcription Right Atrium heart
20 chr1:61598800-61605200 Weak transcription Rectal Smooth Muscle rectum
21 chr1:61598800-61605600 Weak transcription Fetal Intestine Small intestine
22 chr1:61599000-61604600 Weak transcription Liver Liver
23 chr1:61599000-61605000 Weak transcription Brain Germinal Matrix brain
24 chr1:61599000-61606200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr1:61599400-61603800 Weak transcription Aorta Aorta
26 chr1:61599400-61604800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr1:61599400-61604800 Weak transcription HUVEC blood vessel
28 chr1:61599400-61605000 Weak transcription Fetal Lung lung
29 chr1:61599400-61605000 Weak transcription Stomach Smooth Muscle stomach
30 chr1:61599400-61605800 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr1:61599600-61603800 Weak transcription Fetal Stomach stomach
32 chr1:61599600-61604600 Weak transcription Brain Substantia Nigra brain
33 chr1:61599600-61604800 Weak transcription Primary monocytes fromperipheralblood blood
34 chr1:61599600-61604800 Weak transcription Brain Cingulate Gyrus brain
35 chr1:61599600-61605800 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr1:61600000-61604800 Weak transcription HepG2 liver
37 chr1:61600000-61617200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr1:61600200-61604800 Weak transcription Colon Smooth Muscle Colon
39 chr1:61600200-61605000 Weak transcription Small Intestine intestine
40 chr1:61601600-61603000 Weak transcription Psoas Muscle Psoas
41 chr1:61602000-61603400 Weak transcription Brain Anterior Caudate brain
42 chr1:61602000-61603800 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr1:61602000-61604400 Weak transcription Brain Hippocampus Middle brain
44 chr1:61602000-61604800 Weak transcription Fetal Brain Male brain
45 chr1:61602000-61605000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr1:61602200-61604800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr1:61602200-61604800 Weak transcription Fetal Heart heart
48 chr1:61602200-61604800 Weak transcription A549 lung
49 chr1:61602200-61604800 Weak transcription K562 blood
50 chr1:61602200-61605000 Weak transcription Fetal Brain Female brain

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Last update: Aug 31, 2015