Variant report

Variant	rs2861308
Chromosome Location	chr10:98024140-98024141
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:98024012..98025766-chr10:98077469..98079823,2	K562	blood:

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs1075834	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10882761	0.86[ASN][1000 genomes]
rs10882765	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12411820	0.89[ASN][1000 genomes]
rs12414495	0.89[ASN][1000 genomes]
rs12414529	0.89[ASN][1000 genomes]
rs17111536	0.90[ASN][1000 genomes]
rs17111540	0.90[ASN][1000 genomes]
rs1902704	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2861306	0.89[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3762093	0.82[ASN][1000 genomes]
rs3762094	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3789930	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3789933	0.87[ASN][1000 genomes]
rs3789934	0.89[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4917730	0.99[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4919000	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4919001	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57519557	0.81[ASN][1000 genomes]
rs6584061	0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6584064	0.94[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7072251	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7076424	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7085174	0.89[ASN][1000 genomes]
rs7091809	0.80[AMR][1000 genomes]
rs7099796	0.91[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs72637514	0.90[ASN][1000 genomes]
rs72637515	0.90[ASN][1000 genomes]
rs72637516	0.89[ASN][1000 genomes]
rs7894128	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7905645	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7919557	0.82[ASN][1000 genomes]
rs7919588	0.94[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs8181290	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9663433	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9664029	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97996400-98029200	Weak transcription	Fetal Stomach	stomach
2	chr10:98010600-98025400	Weak transcription	Fetal Kidney	kidney
3	chr10:98014400-98027000	Genic enhancers	Primary B cells from peripheral blood	blood
4	chr10:98015400-98026200	Genic enhancers	Primary B cells from cord blood	blood
5	chr10:98015600-98027000	Weak transcription	HUES6 Cell Line	embryonic stem cell
6	chr10:98015800-98026200	Weak transcription	Esophagus	oesophagus
7	chr10:98017000-98024400	Enhancers	Stomach Mucosa	stomach
8	chr10:98019000-98024200	Enhancers	Fetal Intestine Large	intestine
9	chr10:98019600-98025600	Enhancers	Liver	Liver
10	chr10:98019800-98028200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
11	chr10:98020000-98029400	Weak transcription	Skeletal Muscle Female	skeletal muscle
12	chr10:98021000-98029800	Transcr. at gene 5' and 3'	GM12878-XiMat	blood
13	chr10:98022000-98024200	Enhancers	Rectal Mucosa Donor 29	rectum
14	chr10:98022400-98026000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr10:98022600-98026000	Weak transcription	HMEC	breast
16	chr10:98022600-98026800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr10:98022800-98024200	Enhancers	Pancreas	Pancrea
18	chr10:98023400-98026000	Weak transcription	Gastric	stomach
19	chr10:98023600-98026000	Weak transcription	Fetal Intestine Small	intestine
20	chr10:98023600-98026000	Weak transcription	Sigmoid Colon	Sigmoid Colon
21	chr10:98023600-98031800	Weak transcription	Small Intestine	intestine
22	chr10:98023800-98024600	Enhancers	Duodenum Mucosa	Duodenum
23	chr10:98023800-98024600	Enhancers	Placenta	Placenta
24	chr10:98023800-98026200	Weak transcription	Colonic Mucosa	Colon
25	chr10:98023800-98026600	Weak transcription	Placenta Amnion	Placenta Amnion
26	chr10:98023800-98032000	Weak transcription	Spleen	Spleen
27	chr10:98024000-98024200	Enhancers	H9 Cell Line	embryonic stem cell

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