Variant report

Variant	rs2891637
Chromosome Location	chr8:49487041-49487042
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10087276	0.82[AMR][1000 genomes]
rs10087665	0.92[AFR][1000 genomes]
rs10089933	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10091807	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10094801	0.88[JPT][hapmap]
rs10104817	0.80[ASN][1000 genomes]
rs10107213	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10957175	0.82[GIH][hapmap];0.95[MEX][hapmap]
rs11990598	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12386841	0.80[ASN][1000 genomes]
rs13263338	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13265552	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs16937921	0.87[AFR][1000 genomes]
rs16938118	0.82[GIH][hapmap];0.89[MEX][hapmap]
rs1910251	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2200084	0.81[JPT][hapmap]
rs2279300	0.83[ASW][hapmap];0.82[CEU][hapmap];0.81[LWK][hapmap];0.95[MEX][hapmap]
rs2279301	0.83[ASW][hapmap];0.82[CEU][hapmap];0.81[LWK][hapmap];0.95[MEX][hapmap]
rs2279302	0.83[ASW][hapmap];0.82[CEU][hapmap];0.81[LWK][hapmap];0.95[MEX][hapmap]
rs2291225	0.82[CEU][hapmap]
rs2384925	0.86[GIH][hapmap];0.95[MEX][hapmap]
rs5001149	0.88[JPT][hapmap]
rs6471906	0.82[CEU][hapmap];0.82[JPT][hapmap]
rs6981394	0.83[AFR][1000 genomes]
rs6988484	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6990833	1.00[ASW][hapmap];1.00[CEU][hapmap];0.84[CHB][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];0.93[YRI][hapmap];0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7000226	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7012665	1.00[ASW][hapmap];1.00[CEU][hapmap];0.85[CHB][hapmap];0.80[CHD][hapmap];0.95[GIH][hapmap];0.88[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];0.95[TSI][hapmap];0.89[YRI][hapmap];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7013462	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs7014106	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs733192	0.82[CEU][hapmap]
rs7818323	0.94[ASW][hapmap];0.95[CEU][hapmap];0.89[CHB][hapmap];0.91[CHD][hapmap];0.89[GIH][hapmap];0.94[JPT][hapmap];0.91[LWK][hapmap];0.97[MKK][hapmap];0.92[TSI][hapmap];0.86[YRI][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs868444	0.88[JPT][hapmap]
rs937651	0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49477400-49488800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:49482000-49488600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr8:49483000-49490600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr8:49483400-49491400	Weak transcription	NHDF-Ad	bronchial
5	chr8:49483600-49489400	Weak transcription	HMEC	breast
6	chr8:49483600-49491600	Weak transcription	HSMM	muscle
7	chr8:49484000-49493000	Weak transcription	NH-A	brain
8	chr8:49484000-49494400	Weak transcription	Lung	lung
9	chr8:49484600-49494000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr8:49485800-49490200	Enhancers	Fetal Lung	lung
11	chr8:49486000-49487200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr8:49486000-49487200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr8:49486000-49487200	Enhancers	Osteobl	bone
14	chr8:49486200-49487200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr8:49486200-49487200	Enhancers	Muscle Satellite Cultured Cells	--
16	chr8:49486400-49487400	Enhancers	Fetal Stomach	stomach
17	chr8:49486400-49494800	Weak transcription	HUES6 Cell Line	embryonic stem cell
18	chr8:49486400-49494800	Weak transcription	Aorta	Aorta
19	chr8:49486600-49491800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr8:49486600-49491800	Weak transcription	Spleen	Spleen
21	chr8:49486600-49491800	Weak transcription	NHLF	lung
22	chr8:49486600-49503200	Weak transcription	Esophagus	oesophagus
23	chr8:49486800-49489400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
24	chr8:49486800-49492800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
25	chr8:49487000-49487200	Enhancers	Ovary	ovary
26	chr8:49487000-49489600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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