The 2.0 version of rSNPBase

Variant report

Variant rs34190223
Chromosome Location chr3:46426007-46426008
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:46420400-46427600 Weak transcription Pancreas Pancrea
2 chr3:46422200-46435200 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr3:46422400-46426400 Weak transcription H1 Cell Line embryonic stem cell
4 chr3:46422400-46427800 Weak transcription Esophagus oesophagus
5 chr3:46422400-46438600 Weak transcription Psoas Muscle Psoas
6 chr3:46422600-46427600 Weak transcription Hela-S3 cervix
7 chr3:46422600-46435200 Weak transcription Right Atrium heart
8 chr3:46422800-46429400 Enhancers Breast Myoepithelial Primary Cells Breast
9 chr3:46423000-46426400 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr3:46423000-46427600 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr3:46423000-46427600 Weak transcription HSMM muscle
12 chr3:46423000-46427600 Weak transcription HSMMtube muscle
13 chr3:46423400-46427400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr3:46423800-46427400 Weak transcription NHEK skin
15 chr3:46424400-46426800 Enhancers Primary Natural Killer cells fromperipheralblood blood
16 chr3:46424400-46427600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr3:46424400-46428200 Enhancers Primary hematopoietic stem cells short term culture blood
18 chr3:46424400-46428200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr3:46424400-46428200 Enhancers Fetal Thymus thymus
20 chr3:46424400-46428800 Enhancers Primary hematopoietic stem cells blood
21 chr3:46424600-46426400 Enhancers Cortex derived primary cultured neurospheres brain
22 chr3:46424800-46426200 Enhancers Primary monocytes fromperipheralblood blood
23 chr3:46424800-46426200 Enhancers Brain Hippocampus Middle brain
24 chr3:46424800-46426800 Weak transcription Fetal Intestine Small intestine
25 chr3:46425000-46426400 Weak transcription Spleen Spleen
26 chr3:46425000-46426600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr3:46425200-46426200 Enhancers Primary T killer memory cells from peripheral blood blood
28 chr3:46425200-46427000 Enhancers Primary T helper cells fromperipheralblood blood
29 chr3:46425200-46427800 Weak transcription Colonic Mucosa Colon
30 chr3:46425200-46435600 Weak transcription Lung lung
31 chr3:46425400-46426600 Enhancers GM12878-XiMat blood
32 chr3:46425400-46428800 Weak transcription Placenta Placenta
33 chr3:46425400-46441800 Weak transcription Stomach Mucosa stomach
34 chr3:46425600-46427600 Weak transcription Adipose Nuclei Adipose
35 chr3:46425600-46427600 Weak transcription Brain Angular Gyrus brain
36 chr3:46425600-46428200 Enhancers Primary B cells from peripheral blood blood
37 chr3:46425800-46426600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr3:46425800-46426800 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr3:46425800-46427400 Weak transcription Duodenum Mucosa Duodenum
40 chr3:46425800-46427600 Weak transcription Monocytes-CD14+_RO01746 blood
41 chr3:46425800-46428200 Enhancers Primary B cells from cord blood blood
42 chr3:46425800-46429400 Enhancers Dnd41 blood
43 chr3:46425800-46446600 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr3:46426000-46426400 Weak transcription Primary T cells from cord blood blood
45 chr3:46426000-46427000 Weak transcription HMEC breast
46 chr3:46426000-46427400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015