Variant report

Variant	rs3846746
Chromosome Location	chr6:71100283-71100284
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MYC	chr6:71099124-71100357	K562	blood:	n/a	n/a
2	FOXA2	chr6:71099854-71100296	A549	lung:	n/a	n/a
3	TCF7L2	chr6:71099906-71100343	HEK293	kidney:	n/a	n/a
4	TBL1XR1	chr6:71099447-71100468	K562	blood:	n/a	n/a
5	ARID3A	chr6:71099863-71100314	K562	blood:	n/a	n/a
6	FOXA2	chr6:71099564-71100453	HepG2	liver:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:71099555..71102721-chr6:71169036..71172502,3	K562	blood:

Variant related genes	Relation type
ENSG00000237643	TF binding region

Extended variants
information (count: 246 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:238)

rs_ID	r²[population]
rs10214805	0.87[CEU][hapmap]
rs10455706	0.87[CEU][hapmap]
rs10485118	0.92[JPT][hapmap];0.89[ASN][1000 genomes]
rs10485119	0.93[JPT][hapmap];0.82[ASN][1000 genomes]
rs1048886	0.87[CEU][hapmap];0.85[JPT][hapmap]
rs1075262	0.92[JPT][hapmap]
rs1075263	0.88[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10945230	0.87[CEU][hapmap];0.92[JPT][hapmap]
rs10945231	0.93[CEU][hapmap]
rs11965656	0.87[CEU][hapmap];0.92[JPT][hapmap];0.89[ASN][1000 genomes]
rs1208476	0.93[JPT][hapmap]
rs1208477	0.93[JPT][hapmap]
rs1208480	0.89[ASN][1000 genomes]
rs12197942	0.87[CEU][hapmap];0.93[JPT][hapmap]
rs12197963	0.86[CEU][hapmap];0.93[JPT][hapmap]
rs12200777	0.93[CEU][hapmap]
rs12203298	0.93[CEU][hapmap];0.92[JPT][hapmap]
rs12209965	0.87[CEU][hapmap];0.93[JPT][hapmap]
rs12216376	0.93[CEU][hapmap];0.92[JPT][hapmap]
rs12524814	0.87[CEU][hapmap]
rs12526164	0.87[CEU][hapmap];0.92[JPT][hapmap];0.82[ASN][1000 genomes]
rs12526787	0.87[CEU][hapmap]
rs12526827	0.81[CEU][hapmap];0.92[JPT][hapmap];0.89[ASN][1000 genomes]
rs12527634	0.81[CEU][hapmap];0.93[JPT][hapmap];0.82[ASN][1000 genomes]
rs12528391	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12528866	0.89[ASN][1000 genomes]
rs12529284	0.87[CEU][hapmap];0.93[JPT][hapmap]
rs12529309	0.87[CEU][hapmap]
rs12529984	1.00[CEU][hapmap];0.90[EUR][1000 genomes]
rs12530057	0.87[CEU][hapmap]
rs13206086	0.93[JPT][hapmap]
rs16869156	0.94[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16869158	0.94[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16869168	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs16869170	0.88[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs16869211	0.85[JPT][hapmap];0.81[ASN][1000 genomes]
rs16869221	0.92[JPT][hapmap];0.89[ASN][1000 genomes]
rs16869228	0.92[JPT][hapmap];0.89[ASN][1000 genomes]
rs16869238	0.93[JPT][hapmap];0.89[ASN][1000 genomes]
rs16869243	0.93[JPT][hapmap];0.89[ASN][1000 genomes]
rs16869244	0.85[JPT][hapmap]
rs16869267	0.81[CEU][hapmap];0.92[JPT][hapmap];0.89[ASN][1000 genomes]
rs16869273	0.93[JPT][hapmap];0.89[ASN][1000 genomes]
rs16869338	0.93[JPT][hapmap];0.82[ASN][1000 genomes]
rs16869340	0.82[ASN][1000 genomes]
rs16869353	0.92[JPT][hapmap];0.82[ASN][1000 genomes]
rs16869370	0.87[CEU][hapmap];0.92[JPT][hapmap];0.82[ASN][1000 genomes]
rs16869371	0.93[CEU][hapmap];0.92[JPT][hapmap];0.82[ASN][1000 genomes]
rs16869373	0.93[CEU][hapmap];0.92[JPT][hapmap];0.82[ASN][1000 genomes]
rs16880770	0.93[JPT][hapmap];0.82[ASN][1000 genomes]
rs1739338	0.81[CEU][hapmap];0.93[JPT][hapmap];0.85[ASN][1000 genomes]
rs17634272	0.87[CEU][hapmap]
rs17635446	0.87[CEU][hapmap]
rs17635510	0.87[CEU][hapmap]
rs17706748	0.87[CEU][hapmap];0.83[EUR][1000 genomes]
rs17706833	0.87[CEU][hapmap]
rs17713105	0.93[CEU][hapmap]
rs17713212	0.87[CEU][hapmap]
rs17713547	0.87[CEU][hapmap]
rs2207423	0.87[CEU][hapmap];0.93[JPT][hapmap];0.82[ASN][1000 genomes]
rs2207425	0.87[CEU][hapmap]
rs2273210	0.87[CEU][hapmap];0.92[JPT][hapmap];0.89[ASN][1000 genomes]
rs2293297	0.92[CEU][hapmap];0.92[JPT][hapmap];0.80[ASN][1000 genomes]
rs2295200	0.81[CEU][hapmap];0.93[JPT][hapmap];0.82[ASN][1000 genomes]
rs2346889	0.87[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2346890	0.81[CEU][hapmap];0.93[JPT][hapmap];0.85[ASN][1000 genomes]
rs2639291	0.89[ASN][1000 genomes]
rs2639293	0.89[ASN][1000 genomes]
rs2639297	0.87[CEU][hapmap];0.92[JPT][hapmap];0.82[ASN][1000 genomes]
rs2691496	0.87[CEU][hapmap]
rs2747702	0.81[CEU][hapmap];0.93[JPT][hapmap];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2747703	0.92[JPT][hapmap]
rs2842063	0.87[CEU][hapmap];0.85[JPT][hapmap];0.82[ASN][1000 genomes]
rs3193656	0.87[CEU][hapmap];0.91[JPT][hapmap];0.82[ASN][1000 genomes]
rs3736751	0.92[JPT][hapmap];0.93[ASN][1000 genomes]
rs3736752	0.85[JPT][hapmap];0.89[ASN][1000 genomes]
rs3846748	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.87[YRI][hapmap];0.80[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3846750	0.81[CEU][hapmap];0.93[JPT][hapmap];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3889007	0.81[CEU][hapmap];0.93[JPT][hapmap];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs41265349	0.83[EUR][1000 genomes]
rs4283855	0.81[CEU][hapmap];0.93[JPT][hapmap];0.82[ASN][1000 genomes]
rs4496758	0.81[CEU][hapmap];0.93[JPT][hapmap];0.82[ASN][1000 genomes]
rs4707802	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55968813	0.82[ASN][1000 genomes]
rs55990553	0.89[ASN][1000 genomes]
rs56074506	0.82[ASN][1000 genomes]
rs56179165	0.82[ASN][1000 genomes]
rs56322111	0.82[ASN][1000 genomes]
rs56351105	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs56397968	0.83[EUR][1000 genomes]
rs57219733	0.89[ASN][1000 genomes]
rs57343016	0.83[ASN][1000 genomes]
rs57731996	0.82[ASN][1000 genomes]
rs58144467	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs58370765	0.82[ASN][1000 genomes]
rs58377462	0.93[ASN][1000 genomes]
rs58691499	0.89[ASN][1000 genomes]
rs59268472	0.89[ASN][1000 genomes]
rs59275635	0.89[ASN][1000 genomes]
rs59635844	0.89[ASN][1000 genomes]
rs59698166	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs59760243	0.82[ASN][1000 genomes]
rs61223738	0.89[ASN][1000 genomes]
rs61479468	0.93[ASN][1000 genomes]
rs6455367	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6455369	0.82[ASN][1000 genomes]
rs6455370	0.87[CEU][hapmap];0.93[JPT][hapmap];0.82[ASN][1000 genomes]
rs6455371	0.92[JPT][hapmap]
rs6900840	0.80[CEU][hapmap];0.92[JPT][hapmap];0.89[ASN][1000 genomes]
rs6901904	0.89[ASN][1000 genomes]
rs6902773	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6902797	0.90[JPT][hapmap];0.89[ASN][1000 genomes]
rs6902986	1.00[CHB][hapmap];0.92[JPT][hapmap];0.87[YRI][hapmap];0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6906572	0.93[JPT][hapmap];0.89[ASN][1000 genomes]
rs6906592	0.81[CEU][hapmap];0.93[JPT][hapmap];0.89[ASN][1000 genomes]
rs6910177	0.89[ASN][1000 genomes]
rs6910903	0.93[JPT][hapmap];0.82[ASN][1000 genomes]
rs6911812	0.81[CEU][hapmap];0.92[JPT][hapmap];0.89[ASN][1000 genomes]
rs6911983	0.93[CEU][hapmap];0.92[JPT][hapmap];0.82[ASN][1000 genomes]
rs6913548	0.92[JPT][hapmap];0.82[ASN][1000 genomes]
rs6914298	0.89[ASN][1000 genomes]
rs6915405	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6916974	0.87[CEU][hapmap];0.93[JPT][hapmap];0.82[ASN][1000 genomes]
rs6917368	0.93[JPT][hapmap];0.87[ASN][1000 genomes]
rs6918393	0.80[CEU][hapmap];0.85[JPT][hapmap];0.89[ASN][1000 genomes]
rs6919794	0.89[ASN][1000 genomes]
rs6922680	0.93[JPT][hapmap];0.93[ASN][1000 genomes]
rs6923292	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6926591	0.93[JPT][hapmap];0.89[ASN][1000 genomes]
rs6930397	0.93[JPT][hapmap];0.89[ASN][1000 genomes]
rs6931901	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6932470	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6933150	0.81[CEU][hapmap];0.93[JPT][hapmap];0.82[ASN][1000 genomes]
rs6933337	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6933784	0.93[JPT][hapmap];0.89[ASN][1000 genomes]
rs6934660	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6936018	0.89[ASN][1000 genomes]
rs6936550	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6939478	0.93[JPT][hapmap];0.82[ASN][1000 genomes]
rs6939814	0.93[JPT][hapmap];0.82[ASN][1000 genomes]
rs6940416	0.92[JPT][hapmap];0.82[ASN][1000 genomes]
rs6941205	1.00[CHB][hapmap];0.85[JPT][hapmap];0.83[ASN][1000 genomes]
rs6941595	0.82[ASN][1000 genomes]
rs6942012	0.87[CEU][hapmap];0.92[JPT][hapmap];0.82[ASN][1000 genomes]
rs73474910	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73474927	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73474934	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73474937	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73474966	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73474967	0.93[ASN][1000 genomes]
rs73474971	0.93[ASN][1000 genomes]
rs73474974	0.93[ASN][1000 genomes]
rs73474986	0.89[ASN][1000 genomes]
rs73474996	0.89[ASN][1000 genomes]
rs73474998	0.89[ASN][1000 genomes]
rs73476866	0.89[ASN][1000 genomes]
rs73476886	0.89[ASN][1000 genomes]
rs73476890	0.89[ASN][1000 genomes]
rs73476892	0.89[ASN][1000 genomes]
rs73476897	0.89[ASN][1000 genomes]
rs73476899	0.87[ASN][1000 genomes]
rs73476900	0.89[ASN][1000 genomes]
rs73476902	0.89[ASN][1000 genomes]
rs73478808	0.89[ASN][1000 genomes]
rs73478819	0.89[ASN][1000 genomes]
rs73482553	0.89[ASN][1000 genomes]
rs73482554	0.89[ASN][1000 genomes]
rs73482557	0.89[ASN][1000 genomes]
rs73482566	0.89[ASN][1000 genomes]
rs73482583	0.89[ASN][1000 genomes]
rs73482585	0.89[ASN][1000 genomes]
rs73482601	0.85[ASN][1000 genomes]
rs73484507	0.85[ASN][1000 genomes]
rs73485115	0.82[ASN][1000 genomes]
rs73485116	0.82[ASN][1000 genomes]
rs73485118	0.82[ASN][1000 genomes]
rs73485126	0.82[ASN][1000 genomes]
rs73485133	0.82[ASN][1000 genomes]
rs73485137	0.82[ASN][1000 genomes]
rs73485152	0.82[ASN][1000 genomes]
rs73489063	0.82[ASN][1000 genomes]
rs73489067	0.82[ASN][1000 genomes]
rs73489092	0.82[ASN][1000 genomes]
rs7739517	0.82[ASN][1000 genomes]
rs7740873	0.93[CEU][hapmap];0.92[JPT][hapmap];0.82[ASN][1000 genomes]
rs7741187	0.82[ASN][1000 genomes]
rs7741265	0.86[CEU][hapmap];0.93[JPT][hapmap]
rs7742044	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7743819	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7752409	0.87[CEU][hapmap];0.92[JPT][hapmap];0.89[ASN][1000 genomes]
rs7753355	0.81[CEU][hapmap];0.82[CHB][hapmap];0.92[JPT][hapmap];0.85[ASN][1000 genomes]
rs7756774	0.87[CEU][hapmap]
rs7757026	0.87[CEU][hapmap];0.93[JPT][hapmap]
rs7759464	0.87[CEU][hapmap];0.92[JPT][hapmap];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7765110	0.93[JPT][hapmap];0.89[ASN][1000 genomes]
rs7766075	0.81[CEU][hapmap];0.93[JPT][hapmap];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7767109	0.93[JPT][hapmap];0.93[ASN][1000 genomes]
rs7767149	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7769582	0.87[CEU][hapmap];0.92[JPT][hapmap];0.82[ASN][1000 genomes]
rs7773794	0.82[ASN][1000 genomes]
rs7775962	0.81[CEU][hapmap];0.93[JPT][hapmap];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9283835	0.87[CEU][hapmap];0.93[JPT][hapmap];0.82[ASN][1000 genomes]
rs9294868	0.87[CEU][hapmap];0.92[JPT][hapmap];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9294871	0.89[ASN][1000 genomes]
rs9294872	0.81[CEU][hapmap];0.93[JPT][hapmap];0.89[ASN][1000 genomes]
rs9294874	0.81[CEU][hapmap];0.93[JPT][hapmap]
rs9294876	0.93[CEU][hapmap];0.92[JPT][hapmap];0.82[ASN][1000 genomes]
rs9446245	0.87[CEU][hapmap];0.92[JPT][hapmap];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9446246	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9446248	0.81[CEU][hapmap];0.90[JPT][hapmap];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9446252	0.80[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9446258	0.85[ASN][1000 genomes]
rs9446267	0.87[CEU][hapmap];0.93[JPT][hapmap]
rs9455092	0.81[CEU][hapmap];0.93[JPT][hapmap]
rs9455094	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9455097	0.81[CEU][hapmap];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9455100	0.93[ASN][1000 genomes]
rs9455101	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9455104	0.81[CEU][hapmap];0.93[JPT][hapmap];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9455105	0.81[CEU][hapmap];0.86[JPT][hapmap];0.93[ASN][1000 genomes]
rs9455113	0.81[CEU][hapmap];0.93[JPT][hapmap];0.89[ASN][1000 genomes]
rs9455114	0.89[ASN][1000 genomes]
rs9455121	0.81[CEU][hapmap];0.93[JPT][hapmap];0.89[ASN][1000 genomes]
rs9455130	0.92[JPT][hapmap];0.89[ASN][1000 genomes]
rs9455132	0.81[CEU][hapmap];0.93[JPT][hapmap];0.85[ASN][1000 genomes]
rs9455133	0.93[JPT][hapmap]
rs9455139	0.82[ASN][1000 genomes]
rs9455140	0.82[ASN][1000 genomes]
rs9455144	0.82[ASN][1000 genomes]
rs9455150	0.93[CEU][hapmap]
rs9455151	0.87[CEU][hapmap]
rs9455158	0.93[CEU][hapmap];0.85[JPT][hapmap];0.80[ASN][1000 genomes]
rs9455160	0.93[CEU][hapmap];0.92[JPT][hapmap];0.82[ASN][1000 genomes]
rs9455161	0.80[ASN][1000 genomes]
rs9455162	0.86[CEU][hapmap];0.92[JPT][hapmap]
rs9455163	0.93[CEU][hapmap];0.92[JPT][hapmap]
rs9455167	0.83[JPT][hapmap]
rs9455168	0.84[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932111	chr6:70736835-71633094	Enhancers Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
2	nsv886142	chr6:70741209-71251421	Weak transcription Strong transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
3	nsv1027049	chr6:70961610-71561488	Strong transcription Active TSS Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
4	nsv524328	chr6:70961833-71558805	Flanking Bivalent TSS/Enh Active TSS Weak transcription Strong transcription ZNF genes & repeats Enhancers Bivalent Enhancer Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
5	nsv917312	chr6:70961903-71601688	Enhancers Genic enhancers Strong transcription Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
6	nsv1026229	chr6:71016272-71183503	Flanking Active TSS Strong transcription Active TSS Weak transcription Enhancers Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
7	nsv886144	chr6:71018467-71214201	Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
8	nsv1032876	chr6:71048428-71145166	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71097600-71108000	Enhancers	Fetal Intestine Large	intestine
2	chr6:71099400-71108400	Enhancers	Fetal Intestine Small	intestine
3	chr6:71099800-71100400	Enhancers	A549	lung
4	chr6:71099800-71100600	Enhancers	HepG2	liver
5	chr6:71099800-71104800	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr6:71100000-71100400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr6:71100200-71100600	Weak transcription	Duodenum Mucosa	Duodenum
8	chr6:71100200-71100600	Enhancers	K562	blood
9	chr6:71100200-71101800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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