Variant report

Variant rs61479468
Chromosome Location chr6:71124627-71124628
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:71121400-71125200 Active TSS Rectal Smooth Muscle rectum
2 chr6:71121800-71124800 Active TSS iPS-20b Cell Line embryonic stem cell
3 chr6:71122000-71124800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr6:71122000-71124800 Active TSS iPS-18 Cell Line embryonic stem cell
5 chr6:71122000-71125000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr6:71122000-71125200 Active TSS HUES6 Cell Line embryonic stem cell
7 chr6:71122000-71126200 Active TSS GM12878-XiMat blood
8 chr6:71122200-71124800 Active TSS HUES48 Cell Line embryonic stem cell
9 chr6:71122200-71124800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
10 chr6:71122200-71124800 Active TSS A549 lung
11 chr6:71122200-71124800 Active TSS K562 blood
12 chr6:71122200-71125200 Active TSS ES-I3 Cell Line embryonic stem cell
13 chr6:71122200-71125200 Active TSS H1 Cell Line embryonic stem cell
14 chr6:71122200-71125200 Active TSS iPS-15b Cell Line embryonic stem cell
15 chr6:71122200-71125400 Active TSS Pancreatic Islets Pancreatic Islet
16 chr6:71122400-71124800 Active TSS Rectal Mucosa Donor 29 rectum
17 chr6:71122400-71125000 Active TSS Brain Angular Gyrus brain
18 chr6:71122400-71125000 Active TSS Fetal Brain Female brain
19 chr6:71122400-71125000 Active TSS Fetal Thymus thymus
20 chr6:71122400-71125400 Active TSS Duodenum Smooth Muscle Duodenum
21 chr6:71122400-71126200 Active TSS Fetal Intestine Small intestine
22 chr6:71122600-71125000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr6:71122600-71125000 Active TSS NHEK skin
24 chr6:71122600-71126000 Active TSS Fetal Intestine Large intestine
25 chr6:71122800-71124800 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
26 chr6:71122800-71125000 Active TSS HMEC breast
27 chr6:71122800-71125200 Active TSS Rectal Mucosa Donor 31 rectum
28 chr6:71123600-71125200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr6:71123800-71125000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr6:71123800-71125200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
31 chr6:71124000-71157600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr6:71124200-71124800 Flanking Active TSS Cortex derived primary cultured neurospheres brain
33 chr6:71124200-71124800 Active TSS HepG2 liver
34 chr6:71124200-71124800 Enhancers HSMM muscle
35 chr6:71124200-71128200 Weak transcription Gastric stomach
36 chr6:71124200-71128200 Weak transcription Lung lung
37 chr6:71124200-71129800 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr6:71124200-71133400 Weak transcription Small Intestine intestine
39 chr6:71124200-71136200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr6:71124200-71136200 Weak transcription Pancreas Pancrea
41 chr6:71124200-71137800 Weak transcription HSMMtube muscle
42 chr6:71124200-71141000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr6:71124200-71141600 Weak transcription ES-WA7 Cell Line embryonic stem cell
44 chr6:71124200-71143800 Weak transcription Primary T cells fromperipheralblood blood
45 chr6:71124200-71154800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr6:71124200-71157800 Weak transcription Spleen Spleen
47 chr6:71124200-71159800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
48 chr6:71124400-71124800 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr6:71124400-71124800 Enhancers Primary monocytes fromperipheralblood blood
50 chr6:71124400-71124800 Enhancers Primary T helper cells fromperipheralblood blood

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