Variant report

Variant	rs6932470
Chromosome Location	chr6:71121673-71121674
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr6:71121069-71121687	SK-N-MC	brain:	n/a	n/a
2	POLR2A	chr6:71119930-71123467	K562	blood:	n/a	n/a
3	POLR2A	chr6:71121155-71124223	GM12891	blood:	n/a	n/a
4	POLR2A	chr6:71121533-71122342	HepG2	liver:	n/a	n/a
5	POLR2A	chr6:71121543-71121721	MCF10A-Er-Src	breast:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:71121490..71124764-chr6:71274758..71276919,3	K562	blood:
2	chr6:30687827..30689407-chr6:71119779..71122338,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FAM135A-3	chr6:71120633-71122025	NONHSAT113444

Variant related genes	Relation type
FAM135A	TF binding region
ENSG00000154079	Chromatin interaction
ENSG00000196230	Chromatin interaction

Extended variants
information (count: 250 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:240)

rs_ID	r²[population]
rs10214805	0.82[EUR][1000 genomes]
rs10485118	0.93[ASN][1000 genomes]
rs10485119	0.85[ASN][1000 genomes]
rs1075263	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10945230	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11965656	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1208480	0.93[ASN][1000 genomes]
rs12180997	0.82[ASN][1000 genomes]
rs12197942	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12197963	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12203298	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12209965	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12216376	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12524814	0.82[EUR][1000 genomes]
rs12525777	0.85[EUR][1000 genomes]
rs12526164	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12526787	0.85[EUR][1000 genomes]
rs12526827	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12526961	0.85[EUR][1000 genomes]
rs12527634	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12528385	0.85[EUR][1000 genomes]
rs12528391	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12528866	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12529284	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12529309	0.80[EUR][1000 genomes]
rs12529984	0.95[EUR][1000 genomes]
rs12530057	0.80[EUR][1000 genomes]
rs12530358	0.85[EUR][1000 genomes]
rs16869156	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16869158	0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16869168	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16869170	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16869211	0.85[ASN][1000 genomes]
rs16869221	0.93[ASN][1000 genomes]
rs16869228	0.93[ASN][1000 genomes]
rs16869238	0.93[ASN][1000 genomes]
rs16869243	0.93[ASN][1000 genomes]
rs16869244	0.81[ASN][1000 genomes]
rs16869267	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs16869273	0.93[ASN][1000 genomes]
rs16869338	0.85[ASN][1000 genomes]
rs16869340	0.85[ASN][1000 genomes]
rs16869353	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16869370	0.85[ASN][1000 genomes]
rs16869371	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16869373	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16880770	0.85[ASN][1000 genomes]
rs1739338	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17634272	0.87[EUR][1000 genomes]
rs17634491	0.85[EUR][1000 genomes]
rs17635446	0.83[EUR][1000 genomes]
rs17635510	0.83[EUR][1000 genomes]
rs17706748	0.92[EUR][1000 genomes]
rs17706833	0.89[EUR][1000 genomes]
rs17713105	0.85[EUR][1000 genomes]
rs17713212	0.85[EUR][1000 genomes]
rs17713547	0.83[EUR][1000 genomes]
rs2207423	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2207425	0.83[EUR][1000 genomes]
rs2273210	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2293297	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2295200	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2346889	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2346890	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2639291	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2639293	0.93[ASN][1000 genomes]
rs2639297	0.85[ASN][1000 genomes]
rs2747702	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2842063	0.85[ASN][1000 genomes]
rs3193656	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35159719	0.80[EUR][1000 genomes]
rs3736751	0.96[ASN][1000 genomes]
rs3736752	0.93[ASN][1000 genomes]
rs3846746	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3846748	0.90[AFR][1000 genomes];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3846750	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3889007	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs41265349	0.92[EUR][1000 genomes]
rs4283855	0.85[ASN][1000 genomes]
rs4496758	0.85[ASN][1000 genomes]
rs4707802	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs55761717	0.85[EUR][1000 genomes]
rs55968813	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs55990553	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs55990831	0.85[EUR][1000 genomes]
rs56074506	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs56179165	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs56322111	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs56351105	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs56397968	0.92[EUR][1000 genomes]
rs57219733	0.93[ASN][1000 genomes]
rs57343016	0.87[ASN][1000 genomes]
rs57731996	0.85[ASN][1000 genomes]
rs58051327	0.89[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs58144467	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58370765	0.85[ASN][1000 genomes]
rs58377462	0.96[ASN][1000 genomes]
rs58637377	0.85[EUR][1000 genomes]
rs58691499	0.93[ASN][1000 genomes]
rs59268472	0.93[ASN][1000 genomes]
rs59275635	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs59635844	0.93[ASN][1000 genomes]
rs59698166	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs59760243	0.85[ASN][1000 genomes]
rs61223738	0.93[ASN][1000 genomes]
rs61479468	0.96[ASN][1000 genomes]
rs6455367	0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6455369	0.85[ASN][1000 genomes]
rs6455370	0.85[ASN][1000 genomes]
rs6900840	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6901904	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6902773	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6902797	0.93[ASN][1000 genomes]
rs6902986	0.92[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6906572	0.93[ASN][1000 genomes]
rs6906592	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6910177	0.93[ASN][1000 genomes]
rs6910903	0.85[ASN][1000 genomes]
rs6911812	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6911983	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6913548	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6914298	0.93[ASN][1000 genomes]
rs6915405	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6916974	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6917368	0.91[ASN][1000 genomes]
rs6918393	0.93[ASN][1000 genomes]
rs6919794	0.93[ASN][1000 genomes]
rs6922680	0.96[ASN][1000 genomes]
rs6923292	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6926591	0.93[ASN][1000 genomes]
rs6930397	0.93[ASN][1000 genomes]
rs6931901	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6933150	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6933337	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6933784	0.93[ASN][1000 genomes]
rs6934660	0.96[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6936018	0.93[ASN][1000 genomes]
rs6936550	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6939478	0.85[ASN][1000 genomes]
rs6939814	0.85[ASN][1000 genomes]
rs6940416	0.85[ASN][1000 genomes]
rs6941205	0.83[ASN][1000 genomes]
rs6941595	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6942012	0.85[ASN][1000 genomes]
rs73474910	0.96[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73474927	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73474934	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73474937	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73474966	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73474967	0.96[ASN][1000 genomes]
rs73474971	0.96[ASN][1000 genomes]
rs73474974	0.96[ASN][1000 genomes]
rs73474986	0.93[ASN][1000 genomes]
rs73474996	0.93[ASN][1000 genomes]
rs73474998	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73476866	0.93[ASN][1000 genomes]
rs73476886	0.93[ASN][1000 genomes]
rs73476890	0.93[ASN][1000 genomes]
rs73476892	0.93[ASN][1000 genomes]
rs73476897	0.93[ASN][1000 genomes]
rs73476899	0.91[ASN][1000 genomes]
rs73476900	0.93[ASN][1000 genomes]
rs73476902	0.93[ASN][1000 genomes]
rs73478808	0.93[ASN][1000 genomes]
rs73478819	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73480261	0.82[ASN][1000 genomes]
rs73480271	0.82[ASN][1000 genomes]
rs73480275	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs73480280	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs73482553	0.93[ASN][1000 genomes]
rs73482554	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73482557	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73482566	0.93[ASN][1000 genomes]
rs73482583	0.93[ASN][1000 genomes]
rs73482585	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73482601	0.89[ASN][1000 genomes]
rs73484507	0.89[ASN][1000 genomes]
rs73485115	0.85[ASN][1000 genomes]
rs73485116	0.85[ASN][1000 genomes]
rs73485118	0.85[ASN][1000 genomes]
rs73485126	0.85[ASN][1000 genomes]
rs73485133	0.85[ASN][1000 genomes]
rs73485137	0.85[ASN][1000 genomes]
rs73485152	0.85[ASN][1000 genomes]
rs73489063	0.85[ASN][1000 genomes]
rs73489067	0.85[ASN][1000 genomes]
rs73489091	0.84[AMR][1000 genomes]
rs73489092	0.85[ASN][1000 genomes]
rs7739517	0.85[ASN][1000 genomes]
rs7740873	0.85[ASN][1000 genomes]
rs7741187	0.85[ASN][1000 genomes]
rs7741265	0.86[AMR][1000 genomes]
rs7742044	0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7743819	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7752409	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7753355	0.89[ASN][1000 genomes]
rs7756774	0.83[EUR][1000 genomes]
rs7757026	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7759464	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7765110	0.93[ASN][1000 genomes]
rs7766075	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7767109	0.96[ASN][1000 genomes]
rs7767149	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7769582	0.85[ASN][1000 genomes]
rs7773794	0.85[ASN][1000 genomes]
rs7775962	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9283835	0.85[ASN][1000 genomes]
rs9294868	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9294871	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9294872	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9294874	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9294876	0.85[ASN][1000 genomes]
rs9446245	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9446246	0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9446248	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9446252	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9446258	0.89[ASN][1000 genomes]
rs9446267	0.82[ASN][1000 genomes]
rs9455093	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9455094	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9455097	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9455100	0.96[ASN][1000 genomes]
rs9455101	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9455104	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9455105	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9455113	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9455114	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9455121	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9455130	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9455132	0.89[ASN][1000 genomes]
rs9455139	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9455140	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9455144	0.85[ASN][1000 genomes]
rs9455150	0.82[EUR][1000 genomes]
rs9455151	0.82[EUR][1000 genomes]
rs9455158	0.84[ASN][1000 genomes]
rs9455160	0.85[ASN][1000 genomes]
rs9455161	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9455162	0.82[EUR][1000 genomes]
rs9455163	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932111	chr6:70736835-71633094	Enhancers Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
2	nsv886142	chr6:70741209-71251421	Weak transcription Strong transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
3	nsv1027049	chr6:70961610-71561488	Strong transcription Active TSS Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
4	nsv524328	chr6:70961833-71558805	Flanking Bivalent TSS/Enh Active TSS Weak transcription Strong transcription ZNF genes & repeats Enhancers Bivalent Enhancer Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
5	nsv917312	chr6:70961903-71601688	Enhancers Genic enhancers Strong transcription Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
6	nsv1026229	chr6:71016272-71183503	Flanking Active TSS Strong transcription Active TSS Weak transcription Enhancers Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
7	nsv886144	chr6:71018467-71214201	Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
8	nsv1032876	chr6:71048428-71145166	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
9	nsv1027161	chr6:71106657-71145166	Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
10	nsv886145	chr6:71119524-71317480	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71103600-71122400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr6:71116800-71122000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr6:71119200-71122000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr6:71119600-71121800	Weak transcription	Fetal Kidney	kidney
5	chr6:71119600-71122200	Enhancers	Fetal Intestine Large	intestine
6	chr6:71119600-71122200	Enhancers	Fetal Intestine Small	intestine
7	chr6:71119800-71122000	Weak transcription	Placenta	Placenta
8	chr6:71120000-71122400	Weak transcription	Primary monocytes fromperipheralblood	blood
9	chr6:71120400-71122400	Enhancers	Stomach Mucosa	stomach
10	chr6:71121000-71122000	Enhancers	HepG2	liver
11	chr6:71121200-71122000	Enhancers	Colon Smooth Muscle	Colon
12	chr6:71121200-71122000	Active TSS	Rectal Mucosa Donor 29	rectum
13	chr6:71121400-71121800	Flanking Active TSS	A549	lung
14	chr6:71121400-71122000	Enhancers	Duodenum Smooth Muscle	Duodenum
15	chr6:71121400-71122000	Enhancers	Gastric	stomach
16	chr6:71121400-71122000	Enhancers	K562	blood
17	chr6:71121400-71122200	Enhancers	Brain Angular Gyrus	brain
18	chr6:71121400-71122200	Enhancers	Fetal Heart	heart
19	chr6:71121400-71122400	Active TSS	Rectal Mucosa Donor 31	rectum
20	chr6:71121400-71125200	Active TSS	Rectal Smooth Muscle	rectum
21	chr6:71121600-71122000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
22	chr6:71121600-71122000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
23	chr6:71121600-71122000	Enhancers	Dnd41	blood
24	chr6:71121600-71122000	Enhancers	NHLF	lung
25	chr6:71121600-71122200	Enhancers	NHEK	skin
26	chr6:71121600-71122800	Flanking Active TSS	Duodenum Mucosa	Duodenum

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