Variant report

Variant	rs16869243
Chromosome Location	chr6:71171792-71171793
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:71164371..71166082-chr6:71171696..71174304,2	MCF-7	breast:
2	chr6:71104357..71107074-chr6:71171054..71173800,3	K562	blood:
3	chr6:71099555..71102721-chr6:71169036..71172502,3	K562	blood:

Variant related genes	Relation type
ENSG00000237643	Chromatin interaction

Extended variants
information (count: 242 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:234)

rs_ID	r²[population]
rs10485118	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10485119	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs1048886	0.92[JPT][hapmap]
rs1075262	1.00[JPT][hapmap]
rs1075263	1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs10945230	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs11965656	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs1208476	1.00[JPT][hapmap]
rs1208477	1.00[JPT][hapmap]
rs1208480	1.00[ASN][1000 genomes]
rs12180997	0.89[ASN][1000 genomes]
rs12190556	0.85[JPT][hapmap]
rs12197942	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs12197963	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs12203298	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs12209965	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs12216376	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs12526164	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs12526827	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12527634	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs12528391	0.93[ASN][1000 genomes]
rs12528866	1.00[ASN][1000 genomes]
rs12529284	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs13206086	1.00[JPT][hapmap]
rs16869156	1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs16869158	1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs16869168	0.91[ASN][1000 genomes]
rs16869170	1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs16869211	1.00[CHB][hapmap];0.92[JPT][hapmap];0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs16869221	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16869228	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16869238	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16869244	1.00[CHB][hapmap];0.93[JPT][hapmap];0.89[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs16869267	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs16869273	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16869338	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs16869340	0.92[ASN][1000 genomes]
rs16869353	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.92[ASN][1000 genomes]
rs16869370	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs16869371	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs16869373	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs16880770	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs1739338	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs1884251	1.00[CEU][hapmap]
rs2207423	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs2273210	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2293297	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs2295200	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs2346889	1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs2346890	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs2639291	1.00[ASN][1000 genomes]
rs2639293	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2639297	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs2747702	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs2747703	1.00[JPT][hapmap]
rs2842063	1.00[CHB][hapmap];0.92[JPT][hapmap];0.92[ASN][1000 genomes]
rs3193656	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs3736751	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3736752	1.00[CHB][hapmap];0.92[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3763252	0.90[AMR][1000 genomes]
rs3846746	0.93[JPT][hapmap];0.89[ASN][1000 genomes]
rs3846748	1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs3846750	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs3889007	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs4283855	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs4496758	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs4707802	0.89[ASN][1000 genomes]
rs55968813	0.92[ASN][1000 genomes]
rs55990553	1.00[ASN][1000 genomes]
rs56074506	0.92[ASN][1000 genomes]
rs56179165	0.92[ASN][1000 genomes]
rs56322111	0.92[ASN][1000 genomes]
rs56351105	0.91[ASN][1000 genomes]
rs57219733	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs57343016	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs57435529	0.89[AMR][1000 genomes]
rs57563851	0.96[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs57731996	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs58144467	0.93[ASN][1000 genomes]
rs58370765	0.92[ASN][1000 genomes]
rs58377462	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs58691499	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59268472	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs59275635	1.00[ASN][1000 genomes]
rs59372712	0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs59635844	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59698166	1.00[ASN][1000 genomes]
rs59760243	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61223738	1.00[ASN][1000 genomes]
rs61479468	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6455367	1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs6455369	0.92[ASN][1000 genomes]
rs6455370	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs6455371	1.00[JPT][hapmap]
rs6900840	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs6901904	1.00[ASN][1000 genomes]
rs6902773	0.89[ASN][1000 genomes]
rs6902797	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6902986	0.82[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs6906572	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6906592	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs6910177	0.97[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6910903	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6911812	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs6911983	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs6913548	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs6914298	1.00[ASN][1000 genomes]
rs6915405	0.91[JPT][hapmap];0.91[ASN][1000 genomes]
rs6916974	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs6917368	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6918393	0.92[JPT][hapmap];1.00[ASN][1000 genomes]
rs6919794	1.00[ASN][1000 genomes]
rs6922680	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs6923292	0.93[ASN][1000 genomes]
rs6926591	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6930397	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6931901	1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs6932470	0.93[ASN][1000 genomes]
rs6933150	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs6933337	0.87[ASN][1000 genomes]
rs6933784	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6934660	0.91[ASN][1000 genomes]
rs6936018	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6936550	0.91[ASN][1000 genomes]
rs6939478	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs6939814	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs6940416	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs6941205	0.92[JPT][hapmap]
rs6941595	0.92[ASN][1000 genomes]
rs6942012	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs73474910	0.91[ASN][1000 genomes]
rs73474927	0.91[ASN][1000 genomes]
rs73474934	0.93[ASN][1000 genomes]
rs73474937	0.93[ASN][1000 genomes]
rs73474966	0.96[ASN][1000 genomes]
rs73474967	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73474971	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73474974	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73474986	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73474996	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73474998	1.00[ASN][1000 genomes]
rs73476866	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73476886	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73476890	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73476892	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73476897	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73476899	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs73476900	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73476902	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73478808	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73478819	1.00[ASN][1000 genomes]
rs73480261	1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs73480271	1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs73480275	0.83[ASN][1000 genomes]
rs73480280	0.83[ASN][1000 genomes]
rs73482553	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73482554	1.00[ASN][1000 genomes]
rs73482557	1.00[ASN][1000 genomes]
rs73482566	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73482580	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73482583	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73482585	1.00[ASN][1000 genomes]
rs73482601	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73484507	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73485115	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73485116	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73485118	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73485126	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73485133	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73485137	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73485152	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs73489063	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs73489067	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs73489092	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs73490322	0.89[AMR][1000 genomes]
rs73490323	0.86[AMR][1000 genomes]
rs7739098	0.86[JPT][hapmap]
rs7739517	0.92[ASN][1000 genomes]
rs7740873	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs7741187	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7741265	1.00[JPT][hapmap]
rs7742044	0.93[ASN][1000 genomes]
rs7743819	1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs7752409	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7753355	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs7756774	1.00[CHB][hapmap];0.86[ASN][1000 genomes]
rs7757026	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs7759464	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs7765110	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7766075	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs7767109	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7767149	0.93[ASN][1000 genomes]
rs7769582	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs7773794	0.92[ASN][1000 genomes]
rs7775962	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs883707	1.00[CEU][hapmap]
rs9283835	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs9294868	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9294871	1.00[ASN][1000 genomes]
rs9294872	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs9294874	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs9294876	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs9446245	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9446246	0.90[ASN][1000 genomes]
rs9446248	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9446252	1.00[ASN][1000 genomes]
rs9446258	0.96[ASN][1000 genomes]
rs9446267	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs9455092	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9455093	0.81[ASN][1000 genomes]
rs9455094	0.96[ASN][1000 genomes]
rs9455097	0.93[ASN][1000 genomes]
rs9455100	0.96[ASN][1000 genomes]
rs9455101	0.90[ASN][1000 genomes]
rs9455104	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9455105	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9455113	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs9455114	1.00[ASN][1000 genomes]
rs9455121	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs9455130	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs9455132	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9455133	1.00[JPT][hapmap]
rs9455139	0.92[ASN][1000 genomes]
rs9455140	0.92[ASN][1000 genomes]
rs9455144	0.92[ASN][1000 genomes]
rs9455158	1.00[CHB][hapmap];0.92[JPT][hapmap];0.91[ASN][1000 genomes]
rs9455160	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs9455161	0.91[ASN][1000 genomes]
rs9455162	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs9455163	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs9455167	0.82[CHB][hapmap];0.91[JPT][hapmap];0.90[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs9455168	0.92[JPT][hapmap]
rs9455176	0.83[AMR][1000 genomes]
rs9455178	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932111	chr6:70736835-71633094	Enhancers Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
2	nsv886142	chr6:70741209-71251421	Weak transcription Strong transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
3	nsv1027049	chr6:70961610-71561488	Strong transcription Active TSS Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
4	nsv524328	chr6:70961833-71558805	Flanking Bivalent TSS/Enh Active TSS Weak transcription Strong transcription ZNF genes & repeats Enhancers Bivalent Enhancer Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
5	nsv917312	chr6:70961903-71601688	Enhancers Genic enhancers Strong transcription Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
6	nsv1026229	chr6:71016272-71183503	Flanking Active TSS Strong transcription Active TSS Weak transcription Enhancers Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
7	nsv886144	chr6:71018467-71214201	Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
8	nsv886145	chr6:71119524-71317480	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:81 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71124400-71192800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
2	chr6:71125400-71188800	Weak transcription	Colon Smooth Muscle	Colon
3	chr6:71125400-71188800	Weak transcription	HSMM	muscle
4	chr6:71130200-71183200	Weak transcription	Brain Angular Gyrus	brain
5	chr6:71130200-71185400	Weak transcription	K562	blood
6	chr6:71134000-71213400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr6:71136800-71213600	Weak transcription	Brain Substantia Nigra	brain
8	chr6:71141400-71183400	Weak transcription	Right Ventricle	heart
9	chr6:71141400-71186800	Weak transcription	Fetal Brain Female	brain
10	chr6:71148800-71183200	Weak transcription	Rectal Smooth Muscle	rectum
11	chr6:71149000-71183000	Weak transcription	Fetal Kidney	kidney
12	chr6:71149000-71185600	Weak transcription	Aorta	Aorta
13	chr6:71153200-71183200	Weak transcription	HepG2	liver
14	chr6:71154600-71188800	Weak transcription	Fetal Heart	heart
15	chr6:71155000-71185400	Weak transcription	Primary T helper cells fromperipheralblood	blood
16	chr6:71155400-71184000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
17	chr6:71158200-71183200	Weak transcription	Duodenum Smooth Muscle	Duodenum
18	chr6:71158200-71183600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr6:71158200-71185600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr6:71158200-71212400	Weak transcription	Fetal Brain Male	brain
21	chr6:71158400-71178200	Weak transcription	Duodenum Mucosa	Duodenum
22	chr6:71158400-71183200	Weak transcription	Esophagus	oesophagus
23	chr6:71158400-71183400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
24	chr6:71158400-71183400	Weak transcription	Ovary	ovary
25	chr6:71158400-71183600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr6:71158400-71184000	Weak transcription	H9 Cell Line	embryonic stem cell
27	chr6:71158400-71186800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
28	chr6:71158400-71198000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
29	chr6:71158400-71213600	Weak transcription	NHEK	skin
30	chr6:71158600-71172800	Weak transcription	Primary hematopoietic stem cells	blood
31	chr6:71158600-71183600	Weak transcription	Stomach Smooth Muscle	stomach
32	chr6:71158800-71179600	Weak transcription	Fetal Stomach	stomach
33	chr6:71158800-71182800	Weak transcription	Adipose Nuclei	Adipose
34	chr6:71158800-71182800	Weak transcription	Fetal Muscle Leg	muscle
35	chr6:71158800-71183200	Weak transcription	Pancreas	Pancrea
36	chr6:71158800-71183400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
37	chr6:71158800-71212600	Weak transcription	Colonic Mucosa	Colon
38	chr6:71159400-71183000	Weak transcription	Skeletal Muscle Female	skeletal muscle
39	chr6:71159800-71175200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
40	chr6:71159800-71182400	Weak transcription	Rectal Mucosa Donor 29	rectum
41	chr6:71159800-71183400	Weak transcription	Liver	Liver
42	chr6:71162800-71175600	Weak transcription	GM12878-XiMat	blood
43	chr6:71162800-71182800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
44	chr6:71162800-71183200	Weak transcription	Placenta	Placenta
45	chr6:71163000-71175200	Weak transcription	Cortex derived primary cultured neurospheres	brain
46	chr6:71163000-71183000	Weak transcription	H1 Cell Line	embryonic stem cell
47	chr6:71163000-71183200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
48	chr6:71163000-71183200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
49	chr6:71163000-71183400	Weak transcription	Primary B cells from peripheral blood	blood
50	chr6:71163000-71184200	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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