Variant report

Variant	rs73474937
Chromosome Location	chr6:71122212-71122213
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr6:71122120-71124084	K562	blood:	n/a	n/a
2	POLR2A	chr6:71121858-71124306	GM12878	blood:	n/a	n/a
3	POLR2A	chr6:71122070-71123458	MCF10A-Er-Src	breast:	n/a	n/a
4	CEBPB	chr6:71122137-71122621	A549	lung:	n/a	chr6:71122349-71122360
5	POLR2A	chr6:71121804-71123819	H1-hESC	embryonic stem cell:	n/a	n/a
6	POLR2A	chr6:71119930-71123467	K562	blood:	n/a	n/a
7	HCFC1	chr6:71122176-71123572	Hela-S3	cervix:	n/a	n/a
8	POLR2A	chr6:71121155-71124223	GM12891	blood:	n/a	n/a
9	CEBPB	chr6:71122187-71122455	K562	blood:	n/a	chr6:71122349-71122360
10	CEBPB	chr6:71122179-71123397	HepG2	liver:	n/a	chr6:71122349-71122360
11	POLR2A	chr6:71121533-71122342	HepG2	liver:	n/a	n/a
12	POLR2A	chr6:71121964-71122226	H1-hESC	embryonic stem cell:	n/a	n/a
13	CEBPB	chr6:71122143-71122608	K562	blood:	n/a	chr6:71122349-71122360
14	TBP	chr6:71122176-71123145	GM12878	blood:	n/a	n/a
15	ZNF384	chr6:71121982-71122356	K562	blood:	n/a	n/a
16	CEBPB	chr6:71122193-71122511	H1-hESC	embryonic stem cell:	n/a	chr6:71122349-71122360
17	POLR2A	chr6:71122183-71123444	K562	blood:	n/a	n/a
18	MXI1	chr6:71121995-71124509	SK-N-SH	brain:	n/a	chr6:71123802-71123811
19	CEBPB	chr6:71122178-71122595	IMR90	lung:	n/a	chr6:71122349-71122360
20	POLR2A	chr6:71122048-71123935	K562	blood:	n/a	n/a
21	CEBPB	chr6:71122164-71123091	K562	blood:	n/a	chr6:71122349-71122360

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:71121490..71124764-chr6:71274758..71276919,3	K562	blood:
2	chr6:30687827..30689407-chr6:71119779..71122338,2	K562	blood:

Variant related genes	Relation type
FAM135A	TF binding region
ENSG00000154079	Chromatin interaction
ENSG00000196230	Chromatin interaction

Extended variants
information (count: 246 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:236)

rs_ID	r²[population]
rs10214805	0.81[EUR][1000 genomes]
rs10485118	0.93[ASN][1000 genomes]
rs10485119	0.85[ASN][1000 genomes]
rs1075263	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10945230	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11965656	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1208480	0.93[ASN][1000 genomes]
rs12180997	0.82[ASN][1000 genomes]
rs12197942	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12197963	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12203298	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12209965	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12216376	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12524814	0.81[EUR][1000 genomes]
rs12525777	0.84[EUR][1000 genomes]
rs12526164	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12526787	0.84[EUR][1000 genomes]
rs12526827	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12526961	0.84[EUR][1000 genomes]
rs12527634	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12528385	0.84[EUR][1000 genomes]
rs12528391	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12528866	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12529284	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12529984	0.94[EUR][1000 genomes]
rs12530358	0.84[EUR][1000 genomes]
rs16869156	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16869158	0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16869168	0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16869170	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16869211	0.85[ASN][1000 genomes]
rs16869221	0.93[ASN][1000 genomes]
rs16869228	0.93[ASN][1000 genomes]
rs16869238	0.93[ASN][1000 genomes]
rs16869243	0.93[ASN][1000 genomes]
rs16869244	0.81[ASN][1000 genomes]
rs16869267	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs16869273	0.93[ASN][1000 genomes]
rs16869338	0.85[ASN][1000 genomes]
rs16869340	0.85[ASN][1000 genomes]
rs16869353	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16869370	0.85[ASN][1000 genomes]
rs16869371	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16869373	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16880770	0.85[ASN][1000 genomes]
rs1739338	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17634272	0.86[EUR][1000 genomes]
rs17634491	0.84[EUR][1000 genomes]
rs17635446	0.83[EUR][1000 genomes]
rs17635510	0.83[EUR][1000 genomes]
rs17706748	0.91[EUR][1000 genomes]
rs17706833	0.88[EUR][1000 genomes]
rs17713105	0.84[EUR][1000 genomes]
rs17713212	0.84[EUR][1000 genomes]
rs17713547	0.83[EUR][1000 genomes]
rs2207423	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2207425	0.83[EUR][1000 genomes]
rs2273210	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2293297	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2295200	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2346889	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2346890	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2639291	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2639293	0.93[ASN][1000 genomes]
rs2639297	0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2747702	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2842063	0.85[ASN][1000 genomes]
rs3193656	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3736751	0.96[ASN][1000 genomes]
rs3736752	0.93[ASN][1000 genomes]
rs3846746	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3846748	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3846750	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3889007	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs41265349	0.91[EUR][1000 genomes]
rs4283855	0.85[ASN][1000 genomes]
rs4496758	0.85[ASN][1000 genomes]
rs4707802	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs55761717	0.84[EUR][1000 genomes]
rs55968813	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs55990553	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs55990831	0.84[EUR][1000 genomes]
rs56074506	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs56179165	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs56322111	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs56351105	0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs56397968	0.91[EUR][1000 genomes]
rs57219733	0.93[ASN][1000 genomes]
rs57343016	0.87[ASN][1000 genomes]
rs57731996	0.85[ASN][1000 genomes]
rs58051327	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs58144467	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58370765	0.85[ASN][1000 genomes]
rs58377462	0.96[ASN][1000 genomes]
rs58637377	0.84[EUR][1000 genomes]
rs58691499	0.93[ASN][1000 genomes]
rs59268472	0.93[ASN][1000 genomes]
rs59275635	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs59635844	0.93[ASN][1000 genomes]
rs59698166	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs59760243	0.85[ASN][1000 genomes]
rs61223738	0.93[ASN][1000 genomes]
rs61479468	0.96[ASN][1000 genomes]
rs6455367	0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6455369	0.85[ASN][1000 genomes]
rs6455370	0.85[ASN][1000 genomes]
rs6900840	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6901904	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6902773	0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6902797	0.93[ASN][1000 genomes]
rs6902986	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6906572	0.93[ASN][1000 genomes]
rs6906592	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6910177	0.93[ASN][1000 genomes]
rs6910903	0.85[ASN][1000 genomes]
rs6911812	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6911983	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6913548	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6914298	0.93[ASN][1000 genomes]
rs6915405	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6916974	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6917368	0.91[ASN][1000 genomes]
rs6918393	0.80[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6919794	0.93[ASN][1000 genomes]
rs6922680	0.96[ASN][1000 genomes]
rs6923292	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6926591	0.93[ASN][1000 genomes]
rs6930397	0.93[ASN][1000 genomes]
rs6931901	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6932470	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6933150	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6933337	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6933784	0.93[ASN][1000 genomes]
rs6934660	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6936018	0.93[ASN][1000 genomes]
rs6936550	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6939478	0.85[ASN][1000 genomes]
rs6939814	0.85[ASN][1000 genomes]
rs6940416	0.85[ASN][1000 genomes]
rs6941205	0.83[ASN][1000 genomes]
rs6941595	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6942012	0.85[ASN][1000 genomes]
rs73474910	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73474927	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73474934	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73474966	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73474967	0.96[ASN][1000 genomes]
rs73474971	0.96[ASN][1000 genomes]
rs73474974	0.96[ASN][1000 genomes]
rs73474986	0.93[ASN][1000 genomes]
rs73474996	0.93[ASN][1000 genomes]
rs73474998	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73476866	0.93[ASN][1000 genomes]
rs73476886	0.93[ASN][1000 genomes]
rs73476890	0.93[ASN][1000 genomes]
rs73476892	0.93[ASN][1000 genomes]
rs73476897	0.93[ASN][1000 genomes]
rs73476899	0.91[ASN][1000 genomes]
rs73476900	0.93[ASN][1000 genomes]
rs73476902	0.93[ASN][1000 genomes]
rs73478808	0.93[ASN][1000 genomes]
rs73478819	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73480261	0.82[ASN][1000 genomes]
rs73480271	0.82[ASN][1000 genomes]
rs73480275	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs73480280	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs73482553	0.93[ASN][1000 genomes]
rs73482554	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73482557	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73482566	0.93[ASN][1000 genomes]
rs73482583	0.93[ASN][1000 genomes]
rs73482585	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73482601	0.89[ASN][1000 genomes]
rs73484507	0.89[ASN][1000 genomes]
rs73485115	0.85[ASN][1000 genomes]
rs73485116	0.85[ASN][1000 genomes]
rs73485118	0.85[ASN][1000 genomes]
rs73485126	0.85[ASN][1000 genomes]
rs73485133	0.85[ASN][1000 genomes]
rs73485137	0.85[ASN][1000 genomes]
rs73485152	0.85[ASN][1000 genomes]
rs73489063	0.85[ASN][1000 genomes]
rs73489067	0.85[ASN][1000 genomes]
rs73489092	0.85[ASN][1000 genomes]
rs7739517	0.85[ASN][1000 genomes]
rs7740873	0.85[ASN][1000 genomes]
rs7741187	0.85[ASN][1000 genomes]
rs7741265	0.81[AMR][1000 genomes]
rs7742044	0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7743819	0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7752409	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7753355	0.80[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7756774	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7757026	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7759464	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7765110	0.93[ASN][1000 genomes]
rs7766075	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7767109	0.96[ASN][1000 genomes]
rs7767149	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7769582	0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7773794	0.85[ASN][1000 genomes]
rs7775962	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9283835	0.85[ASN][1000 genomes]
rs9294868	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9294871	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9294872	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9294874	0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9294876	0.85[ASN][1000 genomes]
rs9446245	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9446246	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9446248	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9446252	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9446258	0.89[ASN][1000 genomes]
rs9446267	0.82[ASN][1000 genomes]
rs9455093	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9455094	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9455097	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9455100	0.96[ASN][1000 genomes]
rs9455101	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9455104	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9455105	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9455113	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9455114	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9455121	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9455130	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9455132	0.89[ASN][1000 genomes]
rs9455139	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9455140	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9455144	0.85[ASN][1000 genomes]
rs9455150	0.81[EUR][1000 genomes]
rs9455151	0.81[EUR][1000 genomes]
rs9455158	0.84[ASN][1000 genomes]
rs9455160	0.85[ASN][1000 genomes]
rs9455161	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9455162	0.81[EUR][1000 genomes]
rs9455163	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932111	chr6:70736835-71633094	Enhancers Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
2	nsv886142	chr6:70741209-71251421	Weak transcription Strong transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
3	nsv1027049	chr6:70961610-71561488	Strong transcription Active TSS Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
4	nsv524328	chr6:70961833-71558805	Flanking Bivalent TSS/Enh Active TSS Weak transcription Strong transcription ZNF genes & repeats Enhancers Bivalent Enhancer Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
5	nsv917312	chr6:70961903-71601688	Enhancers Genic enhancers Strong transcription Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
6	nsv1026229	chr6:71016272-71183503	Flanking Active TSS Strong transcription Active TSS Weak transcription Enhancers Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
7	nsv886144	chr6:71018467-71214201	Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
8	nsv1032876	chr6:71048428-71145166	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
9	nsv1027161	chr6:71106657-71145166	Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
10	nsv886145	chr6:71119524-71317480	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:105 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71103600-71122400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr6:71120000-71122400	Weak transcription	Primary monocytes fromperipheralblood	blood
3	chr6:71120400-71122400	Enhancers	Stomach Mucosa	stomach
4	chr6:71121400-71122400	Active TSS	Rectal Mucosa Donor 31	rectum
5	chr6:71121400-71125200	Active TSS	Rectal Smooth Muscle	rectum
6	chr6:71121600-71122800	Flanking Active TSS	Duodenum Mucosa	Duodenum
7	chr6:71121800-71122400	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr6:71121800-71122400	Enhancers	Breast Myoepithelial Primary Cells	Breast
9	chr6:71121800-71122400	Enhancers	Left Ventricle	heart
10	chr6:71121800-71122400	Enhancers	Placenta Amnion	Placenta Amnion
11	chr6:71121800-71122400	Enhancers	Spleen	Spleen
12	chr6:71121800-71124400	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr6:71121800-71124600	Active TSS	Fetal Kidney	kidney
14	chr6:71121800-71124800	Active TSS	iPS-20b Cell Line	embryonic stem cell
15	chr6:71122000-71122400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr6:71122000-71122400	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr6:71122000-71122400	Flanking Active TSS	Brain Cingulate Gyrus	brain
18	chr6:71122000-71122400	Flanking Active TSS	Brain Germinal Matrix	brain
19	chr6:71122000-71122400	Flanking Active TSS	Brain Hippocampus Middle	brain
20	chr6:71122000-71122400	Flanking Active TSS	Brain Substantia Nigra	brain
21	chr6:71122000-71122400	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
22	chr6:71122000-71122400	Flanking Active TSS	Fetal Brain Female	brain
23	chr6:71122000-71122400	Enhancers	Placenta	Placenta
24	chr6:71122000-71122400	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
25	chr6:71122000-71122400	Active TSS	HMEC	breast
26	chr6:71122000-71122600	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
27	chr6:71122000-71122600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr6:71122000-71122600	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
29	chr6:71122000-71122600	Weak transcription	Gastric	stomach
30	chr6:71122000-71122800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr6:71122000-71122800	Flanking Active TSS	HUVEC	blood vessel
32	chr6:71122000-71123800	Active TSS	Muscle Satellite Cultured Cells	--
33	chr6:71122000-71124000	Active TSS	Skeletal Muscle Male	skeletal muscle
34	chr6:71122000-71124000	Active TSS	Hela-S3	cervix
35	chr6:71122000-71124000	Active TSS	NHLF	lung
36	chr6:71122000-71124200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
37	chr6:71122000-71124400	Active TSS	H9 Cell Line	embryonic stem cell
38	chr6:71122000-71124400	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
39	chr6:71122000-71124400	Active TSS	HUES64 Cell Line	embryonic stem cell
40	chr6:71122000-71124400	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
41	chr6:71122000-71124600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
42	chr6:71122000-71124600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
43	chr6:71122000-71124600	Active TSS	Colonic Mucosa	Colon
44	chr6:71122000-71124600	Active TSS	Stomach Smooth Muscle	stomach
45	chr6:71122000-71124800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
46	chr6:71122000-71124800	Active TSS	iPS-18 Cell Line	embryonic stem cell
47	chr6:71122000-71125000	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
48	chr6:71122000-71125200	Active TSS	HUES6 Cell Line	embryonic stem cell
49	chr6:71122000-71126200	Active TSS	GM12878-XiMat	blood
50	chr6:71122200-71122400	Enhancers	Primary B cells from cord blood	blood

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