Variant report

Variant	rs3736751
Chromosome Location	chr6:71138328-71138329
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:71103303..71106038-chr6:71138215..71140501,3	K562	blood:

Variant related genes	Relation type
ENSG00000237643	Chromatin interaction

Extended variants
information (count: 244 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:233)

rs_ID	r²[population]
rs10485118	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs10485119	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs1048886	0.92[JPT][hapmap]
rs1075262	1.00[JPT][hapmap]
rs1075263	1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs10945230	1.00[JPT][hapmap]
rs11965656	0.81[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs1208476	1.00[JPT][hapmap]
rs1208477	1.00[JPT][hapmap]
rs1208480	0.96[ASN][1000 genomes]
rs12180997	0.85[ASN][1000 genomes]
rs12190556	0.84[JPT][hapmap]
rs12197942	1.00[JPT][hapmap]
rs12197963	1.00[JPT][hapmap]
rs12203298	1.00[JPT][hapmap]
rs12209965	1.00[JPT][hapmap]
rs12216376	1.00[JPT][hapmap]
rs12526164	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs12526827	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs12527634	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs12528391	0.96[ASN][1000 genomes]
rs12528866	0.96[ASN][1000 genomes]
rs12529284	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs13206086	1.00[JPT][hapmap]
rs16869156	1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs16869158	1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs16869168	0.94[ASN][1000 genomes]
rs16869170	1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs16869211	1.00[CHB][hapmap];0.87[CHD][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];0.82[MEX][hapmap];0.89[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs16869221	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16869228	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16869238	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16869243	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16869244	1.00[CHB][hapmap];0.92[JPT][hapmap];0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs16869267	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs16869273	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs16869338	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs16869340	0.89[ASN][1000 genomes]
rs16869353	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.87[MKK][hapmap];0.89[ASN][1000 genomes]
rs16869370	1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs16869371	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs16869373	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs16880770	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs1739338	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs1884251	1.00[CEU][hapmap]
rs2207423	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs2273210	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs2293297	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs2295200	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs2346889	1.00[CHD][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs2346890	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs2639291	0.96[ASN][1000 genomes]
rs2639293	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2639297	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs2747702	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2747703	1.00[JPT][hapmap]
rs2842063	1.00[CHB][hapmap];0.88[CHD][hapmap];0.92[JPT][hapmap];0.89[ASN][1000 genomes]
rs3193656	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs3736752	1.00[CHB][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];0.92[LWK][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3763252	0.90[AMR][1000 genomes]
rs3846746	0.92[JPT][hapmap];0.93[ASN][1000 genomes]
rs3846748	1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs3846750	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs3889007	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4283855	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs4496758	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs4707802	0.93[ASN][1000 genomes]
rs55968813	0.89[ASN][1000 genomes]
rs55990553	0.96[ASN][1000 genomes]
rs56074506	0.89[ASN][1000 genomes]
rs56179165	0.89[ASN][1000 genomes]
rs56322111	0.89[ASN][1000 genomes]
rs56351105	0.94[ASN][1000 genomes]
rs57219733	1.00[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs57343016	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs57435529	0.89[AMR][1000 genomes]
rs57563851	0.96[AMR][1000 genomes]
rs57731996	1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs58051327	0.81[ASN][1000 genomes]
rs58144467	0.96[ASN][1000 genomes]
rs58370765	0.89[ASN][1000 genomes]
rs58377462	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58691499	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs59268472	1.00[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs59275635	0.96[ASN][1000 genomes]
rs59372712	0.89[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs59635844	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs59698166	0.96[ASN][1000 genomes]
rs59760243	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs61223738	0.96[ASN][1000 genomes]
rs61479468	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6455367	1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs6455369	0.89[ASN][1000 genomes]
rs6455370	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs6455371	1.00[JPT][hapmap]
rs6900840	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs6901904	0.96[ASN][1000 genomes]
rs6902773	0.92[ASN][1000 genomes]
rs6902797	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6902986	0.82[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs6906572	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6906592	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs6910177	0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs6910903	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6911812	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs6911983	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs6913548	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs6914298	0.96[ASN][1000 genomes]
rs6915405	1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs6916974	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs6917368	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6918393	0.92[JPT][hapmap];0.96[ASN][1000 genomes]
rs6919794	0.96[ASN][1000 genomes]
rs6922680	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6923292	0.96[ASN][1000 genomes]
rs6926591	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6930397	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6931901	1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs6932470	0.96[ASN][1000 genomes]
rs6933150	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs6933337	0.91[ASN][1000 genomes]
rs6933784	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6934660	0.94[ASN][1000 genomes]
rs6936018	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6936550	0.94[ASN][1000 genomes]
rs6939478	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs6939814	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs6940416	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs6941205	1.00[GIH][hapmap];0.92[JPT][hapmap];1.00[TSI][hapmap]
rs6941595	0.89[ASN][1000 genomes]
rs6942012	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs73474910	0.94[ASN][1000 genomes]
rs73474927	0.94[ASN][1000 genomes]
rs73474934	0.96[ASN][1000 genomes]
rs73474937	0.96[ASN][1000 genomes]
rs73474966	1.00[ASN][1000 genomes]
rs73474967	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73474971	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73474974	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73474986	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73474996	1.00[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs73474998	0.96[ASN][1000 genomes]
rs73476866	1.00[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs73476886	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73476890	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73476892	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73476897	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73476899	1.00[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs73476900	1.00[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs73476902	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73478808	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73478819	0.96[ASN][1000 genomes]
rs73480261	1.00[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs73480271	1.00[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs73482553	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73482554	0.96[ASN][1000 genomes]
rs73482557	0.96[ASN][1000 genomes]
rs73482566	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73482580	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs73482583	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73482585	0.96[ASN][1000 genomes]
rs73482601	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73484507	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73485115	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73485116	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73485118	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73485126	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73485133	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73485137	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73485152	1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs73489063	1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs73489067	1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs73489092	1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs73490322	0.89[AMR][1000 genomes]
rs73490323	0.86[AMR][1000 genomes]
rs7739098	0.86[JPT][hapmap]
rs7739517	0.89[ASN][1000 genomes]
rs7740873	1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs7741187	1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs7741265	1.00[JPT][hapmap]
rs7742044	0.96[ASN][1000 genomes]
rs7743819	1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs7752409	1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs7753355	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs7756774	1.00[CHB][hapmap];0.82[ASN][1000 genomes]
rs7757026	1.00[JPT][hapmap]
rs7759464	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7765110	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7766075	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7767109	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7767149	0.96[ASN][1000 genomes]
rs7769582	1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs7773794	0.89[ASN][1000 genomes]
rs7775962	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs883707	1.00[CEU][hapmap]
rs9283835	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs9294868	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs9294871	0.96[ASN][1000 genomes]
rs9294872	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9294874	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs9294876	1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs9446245	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs9446246	0.94[ASN][1000 genomes]
rs9446248	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs9446252	0.96[ASN][1000 genomes]
rs9446258	0.92[ASN][1000 genomes]
rs9446267	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs9455092	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9455093	0.85[ASN][1000 genomes]
rs9455094	1.00[ASN][1000 genomes]
rs9455097	0.96[ASN][1000 genomes]
rs9455100	1.00[ASN][1000 genomes]
rs9455101	0.94[ASN][1000 genomes]
rs9455104	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs9455105	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs9455113	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9455114	0.96[ASN][1000 genomes]
rs9455121	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9455130	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9455132	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs9455133	1.00[JPT][hapmap]
rs9455139	0.89[ASN][1000 genomes]
rs9455140	0.89[ASN][1000 genomes]
rs9455144	0.89[ASN][1000 genomes]
rs9455158	1.00[CHB][hapmap];0.92[JPT][hapmap];0.87[ASN][1000 genomes]
rs9455160	1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs9455161	0.87[ASN][1000 genomes]
rs9455162	1.00[JPT][hapmap]
rs9455163	1.00[JPT][hapmap]
rs9455167	0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.90[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs9455168	0.91[JPT][hapmap]
rs9455176	0.83[AMR][1000 genomes]
rs9455178	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932111	chr6:70736835-71633094	Enhancers Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
2	nsv886142	chr6:70741209-71251421	Weak transcription Strong transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
3	nsv1027049	chr6:70961610-71561488	Strong transcription Active TSS Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
4	nsv524328	chr6:70961833-71558805	Flanking Bivalent TSS/Enh Active TSS Weak transcription Strong transcription ZNF genes & repeats Enhancers Bivalent Enhancer Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
5	nsv917312	chr6:70961903-71601688	Enhancers Genic enhancers Strong transcription Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
6	nsv1026229	chr6:71016272-71183503	Flanking Active TSS Strong transcription Active TSS Weak transcription Enhancers Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
7	nsv886144	chr6:71018467-71214201	Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
8	nsv1032876	chr6:71048428-71145166	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
9	nsv1027161	chr6:71106657-71145166	Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
10	nsv886145	chr6:71119524-71317480	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
11	nsv966632	chr6:71138127-71144459	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:115 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71124000-71157600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr6:71124200-71141000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr6:71124200-71141600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr6:71124200-71143800	Weak transcription	Primary T cells fromperipheralblood	blood
5	chr6:71124200-71154800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr6:71124200-71157800	Weak transcription	Spleen	Spleen
7	chr6:71124200-71159800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr6:71124400-71138400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
9	chr6:71124400-71139000	Weak transcription	Liver	Liver
10	chr6:71124400-71140400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
11	chr6:71124400-71143000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
12	chr6:71124400-71143200	Weak transcription	Psoas Muscle	Psoas
13	chr6:71124400-71148800	Weak transcription	NHLF	lung
14	chr6:71124400-71152800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
15	chr6:71124400-71159800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr6:71124400-71160400	Weak transcription	Placenta Amnion	Placenta Amnion
17	chr6:71124400-71192800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
18	chr6:71124600-71139600	Weak transcription	Ovary	ovary
19	chr6:71124600-71140200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr6:71124600-71140600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr6:71124600-71141000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr6:71124600-71142600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
23	chr6:71124600-71142800	Weak transcription	NHDF-Ad	bronchial
24	chr6:71124600-71145000	Weak transcription	HUVEC	blood vessel
25	chr6:71124600-71157200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
26	chr6:71124600-71157800	Weak transcription	Colonic Mucosa	Colon
27	chr6:71125000-71139400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
28	chr6:71125000-71140000	Weak transcription	Fetal Brain Female	brain
29	chr6:71125000-71145000	Weak transcription	Fetal Thymus	thymus
30	chr6:71125000-71147400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
31	chr6:71125000-71148400	Weak transcription	Brain Germinal Matrix	brain
32	chr6:71125000-71148800	Weak transcription	Fetal Brain Male	brain
33	chr6:71125200-71140000	Weak transcription	Rectal Smooth Muscle	rectum
34	chr6:71125200-71140200	Weak transcription	Brain Anterior Caudate	brain
35	chr6:71125200-71142200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
36	chr6:71125400-71188800	Weak transcription	Colon Smooth Muscle	Colon
37	chr6:71125400-71188800	Weak transcription	HSMM	muscle
38	chr6:71125600-71143000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
39	chr6:71125600-71162400	Weak transcription	Primary T helper cells PMA-I stimulated	--
40	chr6:71126000-71157800	Weak transcription	Dnd41	blood
41	chr6:71128600-71156800	Weak transcription	Brain Cingulate Gyrus	brain
42	chr6:71128800-71138600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
43	chr6:71128800-71139000	Weak transcription	Adipose Nuclei	Adipose
44	chr6:71128800-71140000	Weak transcription	Gastric	stomach
45	chr6:71128800-71140000	Weak transcription	Skeletal Muscle Male	skeletal muscle
46	chr6:71128800-71140600	Weak transcription	Esophagus	oesophagus
47	chr6:71128800-71140800	Weak transcription	Aorta	Aorta
48	chr6:71128800-71154800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
49	chr6:71128800-71157800	Weak transcription	H9 Cell Line	embryonic stem cell
50	chr6:71129000-71138800	Weak transcription	Cortex derived primary cultured neurospheres	brain

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