Variant report

Variant	rs4747465
Chromosome Location	chr10:23639455-23639456
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs10159586	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10159622	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10159725	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1039966	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10734044	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10734045	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10741025	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs10764400	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10828434	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11013395	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11013408	0.86[EUR][1000 genomes]
rs11013409	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2036917	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2036918	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2036919	0.85[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2036920	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2036921	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2137156	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2175503	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4075675	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4326695	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4575157	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4747464	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4748852	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs4748864	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4748865	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4748867	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4748868	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4748869	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4748870	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4748872	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4748873	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6482267	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6482268	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6482269	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7076538	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7085049	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7087803	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7092292	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7095180	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs7100583	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs7893984	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7894108	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7894725	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7898413	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7913858	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7923763	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs869158	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs9299781	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9299782	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23633800-23640400	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr10:23633800-23640600	Weak transcription	Placenta	Placenta
3	chr10:23633800-23641000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr10:23634400-23641000	Weak transcription	HSMMtube	muscle
5	chr10:23634600-23640200	Weak transcription	NHLF	lung
6	chr10:23635200-23640600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr10:23635200-23643800	Weak transcription	Fetal Kidney	kidney
8	chr10:23635400-23640000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr10:23635400-23640600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr10:23635600-23640200	Weak transcription	NHEK	skin
11	chr10:23635600-23640400	Weak transcription	HMEC	breast
12	chr10:23635600-23640400	Weak transcription	Osteobl	bone
13	chr10:23635800-23640000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr10:23636600-23640000	Weak transcription	Hela-S3	cervix
15	chr10:23636800-23640400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr10:23639200-23639600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin

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