Variant report

Variant	rs4813461
Chromosome Location	chr20:22516648-22516649
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs1203869	0.93[ASN][1000 genomes]
rs1203870	0.86[ASN][1000 genomes]
rs1203878	0.86[ASN][1000 genomes]
rs1203882	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs1203887	1.00[YRI][hapmap]
rs1203897	0.86[ASN][1000 genomes]
rs1203900	0.86[ASN][1000 genomes]
rs1203901	0.86[ASN][1000 genomes]
rs1203903	0.86[ASN][1000 genomes]
rs1203904	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs1203906	0.86[ASN][1000 genomes]
rs1203908	0.86[ASN][1000 genomes]
rs1415817	1.00[AMR][1000 genomes]
rs1415818	1.00[ASN][1000 genomes]
rs1538218	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs1538219	0.90[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs1572580	0.93[ASN][1000 genomes]
rs1890207	0.93[ASN][1000 genomes]
rs1890208	0.93[ASN][1000 genomes]
rs1999862	0.93[ASN][1000 genomes]
rs2152935	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs2404166	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs2896772	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs4813458	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs4815118	0.93[ASN][1000 genomes]
rs4815120	0.93[ASN][1000 genomes]
rs6036133	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6036136	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs6036139	0.93[ASN][1000 genomes]
rs6048150	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs6048151	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs6048152	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs6048161	0.93[ASN][1000 genomes]
rs6048170	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs6048174	1.00[ASN][1000 genomes]
rs6048175	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6048176	1.00[ASN][1000 genomes]
rs6048181	0.85[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6082724	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6082732	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs6082736	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs6082739	0.93[ASN][1000 genomes]
rs6082740	1.00[ASN][1000 genomes]
rs6082741	0.90[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6113696	0.93[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:22506800-22519000	Enhancers	HepG2	liver
2	chr20:22510600-22521600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr20:22513000-22517000	Weak transcription	A549	lung
4	chr20:22514800-22517400	Weak transcription	Fetal Intestine Large	intestine
5	chr20:22515000-22517600	Weak transcription	Stomach Mucosa	stomach
6	chr20:22515000-22544200	Weak transcription	Pancreas	Pancrea
7	chr20:22515600-22517200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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