Variant report
| Variant | rs1203901 |
|---|---|
| Chromosome Location | chr20:22558138-22558139 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr20:22552000-22558200 | Bivalent Enhancer | HUES48 Cell Line | embryonic stem cell |
| 2 | chr20:22555200-22558600 | Bivalent Enhancer | ES-I3 Cell Line | embryonic stem cell |
| 3 | chr20:22555200-22560400 | Bivalent Enhancer | H1 Cell Line | embryonic stem cell |
| 4 | chr20:22555400-22558800 | Bivalent Enhancer | iPS-18 Cell Line | embryonic stem cell |
| 5 | chr20:22555400-22559200 | Bivalent Enhancer | ES-UCSF4 Cell Line | embryonic stem cell |
| 6 | chr20:22555600-22558200 | Bivalent Enhancer | iPS DF 19.11 Cell Line | embryonic stem cell |
| 7 | chr20:22555600-22559200 | Bivalent Enhancer | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 8 | chr20:22555600-22559200 | Bivalent Enhancer | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 9 | chr20:22556800-22559200 | Active TSS | Gastric | stomach |
| 10 | chr20:22556800-22559400 | Bivalent/Poised TSS | Fetal Stomach | stomach |
| 11 | chr20:22556800-22560800 | Active TSS | Pancreatic Islets | Pancreatic Islet |
| 12 | chr20:22557000-22558400 | Bivalent/Poised TSS | Colonic Mucosa | Colon |
| 13 | chr20:22557000-22559200 | Bivalent/Poised TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 14 | chr20:22557200-22559200 | Bivalent/Poised TSS | Fetal Intestine Large | intestine |
| 15 | chr20:22557400-22558600 | Weak transcription | A549 | lung |
| 16 | chr20:22557400-22559400 | Bivalent/Poised TSS | Stomach Mucosa | stomach |
| 17 | chr20:22557400-22559600 | Active TSS | Liver | Liver |
| 18 | chr20:22557400-22560400 | Active TSS | Pancreas | Pancrea |
| 19 | chr20:22557800-22558200 | Bivalent Enhancer | HMEC | breast |
| 20 | chr20:22557800-22558400 | Active TSS | Rectal Mucosa Donor 31 | rectum |
| 21 | chr20:22557800-22558400 | Bivalent Enhancer | Spleen | Spleen |
| 22 | chr20:22557800-22558600 | Bivalent Enhancer | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 23 | chr20:22557800-22559400 | Bivalent Enhancer | Skeletal Muscle Male | skeletal muscle |
| 24 | chr20:22558000-22558200 | Bivalent Enhancer | iPS-15b Cell Line | embryonic stem cell |
| 25 | chr20:22558000-22558200 | Bivalent Enhancer | Fetal Muscle Leg | muscle |
| 26 | chr20:22558000-22558200 | Bivalent Enhancer | Rectal Mucosa Donor 29 | rectum |
| 27 | chr20:22558000-22558600 | Bivalent/Poised TSS | HUES6 Cell Line | embryonic stem cell |
| 28 | chr20:22558000-22558800 | Bivalent/Poised TSS | Sigmoid Colon | Sigmoid Colon |
| 29 | chr20:22558000-22559000 | Bivalent Enhancer | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 30 | chr20:22558000-22559000 | Flanking Bivalent TSS/Enh | Fetal Intestine Small | intestine |
| 31 | chr20:22558000-22559200 | Bivalent/Poised TSS | HepG2 | liver |
