Variant report

Variant	rs4854732
Chromosome Location	chr3:133265737-133265738
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10433415	0.97[ASN][1000 genomes]
rs10935068	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13091585	0.80[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1382701	0.97[ASN][1000 genomes]
rs1444600	0.97[ASN][1000 genomes]
rs1842155	0.97[ASN][1000 genomes]
rs1867506	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2002016	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35318210	0.97[ASN][1000 genomes]
rs3860498	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4017074	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4527377	0.97[ASN][1000 genomes]
rs4854723	0.91[ASN][1000 genomes]
rs4854724	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4854727	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4854729	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4854733	0.95[ASN][1000 genomes]
rs56320905	0.85[AFR][1000 genomes]
rs56381780	0.83[AFR][1000 genomes]
rs56400108	0.85[AFR][1000 genomes]
rs62280439	0.85[AFR][1000 genomes]
rs62282383	0.85[AFR][1000 genomes]
rs66549971	0.85[AFR][1000 genomes]
rs6763627	0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6773777	0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6773891	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6778062	0.97[ASN][1000 genomes]
rs6785365	0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6809513	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7614812	0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8180106	0.85[AFR][1000 genomes]
rs872134	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:41 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:133260200-133268000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr3:133260400-133265800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr3:133260400-133265800	Weak transcription	Fetal Muscle Leg	muscle
4	chr3:133260400-133265800	Weak transcription	Lung	lung
5	chr3:133260400-133266200	Weak transcription	Esophagus	oesophagus
6	chr3:133260600-133265800	Weak transcription	Stomach Mucosa	stomach
7	chr3:133260600-133265800	Weak transcription	NH-A	brain
8	chr3:133260600-133266000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr3:133260600-133266000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr3:133260600-133266000	Weak transcription	Rectal Mucosa Donor 31	rectum
11	chr3:133260600-133266000	Weak transcription	Sigmoid Colon	Sigmoid Colon
12	chr3:133260600-133266000	Weak transcription	HMEC	breast
13	chr3:133261800-133265800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr3:133262200-133266000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr3:133262600-133266000	Weak transcription	Fetal Lung	lung
16	chr3:133263400-133267400	Enhancers	Liver	Liver
17	chr3:133264000-133267200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr3:133264600-133266600	Weak transcription	GM12878-XiMat	blood
19	chr3:133264600-133267800	Enhancers	Placenta	Placenta
20	chr3:133265000-133265800	Weak transcription	HepG2	liver
21	chr3:133265000-133266000	Weak transcription	Pancreas	Pancrea
22	chr3:133265400-133266200	Enhancers	HSMM	muscle
23	chr3:133265400-133267000	Enhancers	Fetal Muscle Trunk	muscle
24	chr3:133265400-133267200	Enhancers	Stomach Smooth Muscle	stomach
25	chr3:133265400-133267400	Enhancers	Fetal Heart	heart
26	chr3:133265600-133266000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
27	chr3:133265600-133266200	Enhancers	Skeletal Muscle Male	skeletal muscle
28	chr3:133265600-133266200	Flanking Active TSS	HSMMtube	muscle
29	chr3:133265600-133266400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr3:133265600-133266600	Enhancers	Osteobl	bone
31	chr3:133265600-133266800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
32	chr3:133265600-133267000	Enhancers	Ovary	ovary
33	chr3:133265600-133267200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
34	chr3:133265600-133267200	Enhancers	Adipose Nuclei	Adipose
35	chr3:133265600-133267200	Enhancers	Fetal Stomach	stomach
36	chr3:133265600-133267400	Enhancers	Skeletal Muscle Female	skeletal muscle
37	chr3:133265600-133267400	Enhancers	A549	lung
38	chr3:133265600-133267400	Enhancers	NHLF	lung
39	chr3:133265600-133267600	Enhancers	NHDF-Ad	bronchial
40	chr3:133265600-133267800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr3:133265600-133268000	Enhancers	Muscle Satellite Cultured Cells	--

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