Variant report
| Variant | rs55696440 |
|---|---|
| Chromosome Location | chr17:46271146-46271147 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr17:46251200-46277400 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 2 | chr17:46252000-46271400 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 3 | chr17:46265800-46276200 | Weak transcription | GM12878-XiMat | blood |
| 4 | chr17:46266800-46271400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 5 | chr17:46266800-46298600 | Weak transcription | Thymus | Thymus |
| 6 | chr17:46266800-46318200 | Weak transcription | Primary B cells from peripheral blood | blood |
| 7 | chr17:46267400-46271200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 8 | chr17:46268000-46271400 | Strong transcription | Primary T cells from cord blood | blood |
| 9 | chr17:46268400-46271800 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 10 | chr17:46268400-46272400 | Enhancers | ES-WA7 Cell Line | embryonic stem cell |
| 11 | chr17:46269200-46271200 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 12 | chr17:46269200-46272000 | Enhancers | H1 Cell Line | embryonic stem cell |
| 13 | chr17:46269400-46271400 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 14 | chr17:46269600-46272000 | Enhancers | Osteobl | bone |
| 15 | chr17:46270000-46271400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 16 | chr17:46270000-46271600 | Weak transcription | A549 | lung |
| 17 | chr17:46270200-46271400 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 18 | chr17:46270200-46271400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 19 | chr17:46270200-46272600 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 20 | chr17:46270200-46272600 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 21 | chr17:46270400-46271400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 22 | chr17:46270400-46271800 | Weak transcription | HSMMtube | muscle |
| 23 | chr17:46270400-46272400 | Enhancers | HUES64 Cell Line | embryonic stem cell |
| 24 | chr17:46270400-46272600 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
| 25 | chr17:46270400-46272600 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 26 | chr17:46270400-46272600 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
| 27 | chr17:46270600-46271200 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 28 | chr17:46270800-46271200 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 29 | chr17:46270800-46271200 | Enhancers | H9 Cell Line | embryonic stem cell |
| 30 | chr17:46270800-46271200 | Genic enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 31 | chr17:46270800-46271200 | Strong transcription | Fetal Thymus | thymus |
| 32 | chr17:46270800-46272600 | Enhancers | NH-A | brain |
| 33 | chr17:46270800-46272800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 34 | chr17:46270800-46272800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 35 | chr17:46270800-46272800 | Enhancers | HSMM | muscle |
| 36 | chr17:46271000-46271200 | Genic enhancers | Primary T cells fromperipheralblood | blood |
| 37 | chr17:46271000-46271200 | Genic enhancers | Primary T helper cells fromperipheralblood | blood |
| 38 | chr17:46271000-46272200 | Enhancers | Primary hematopoietic stem cells | blood |
| 39 | chr17:46271000-46272200 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 40 | chr17:46271000-46272400 | Enhancers | Muscle Satellite Cultured Cells | -- |
| 41 | chr17:46271000-46272400 | Enhancers | HUVEC | blood vessel |
| 42 | chr17:46271000-46273200 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
| 43 | chr17:46271000-46273200 | Enhancers | Primary T killer memory cells from peripheral blood | blood |
| 44 | chr17:46271000-46273600 | Enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
| 45 | chr17:46271000-46274200 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 46 | chr17:46271000-46274600 | Enhancers | Primary T helper cells PMA-I stimulated | -- |
