The 2.0 version of rSNPBase

Variant report

Variant rs55776402
Chromosome Location chr11:15995176-15995177
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:15990400-15995200 Weak transcription Fetal Muscle Trunk muscle
2 chr11:15990400-16011600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr11:15991200-15996000 Weak transcription Brain Germinal Matrix brain
4 chr11:15991600-16006600 Weak transcription Liver Liver
5 chr11:15991800-15997200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr11:15991800-15997400 Weak transcription HepG2 liver
7 chr11:15991800-15998000 Weak transcription Aorta Aorta
8 chr11:15991800-16006800 Weak transcription Fetal Muscle Leg muscle
9 chr11:15992000-15997200 Weak transcription NHLF lung
10 chr11:15992000-15997400 Weak transcription Fetal Lung lung
11 chr11:15992000-15997400 Weak transcription Placenta Amnion Placenta Amnion
12 chr11:15992400-16006600 Weak transcription Duodenum Mucosa Duodenum
13 chr11:15992600-15997600 Weak transcription Fetal Heart heart
14 chr11:15992600-15998000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr11:15992600-16002400 Weak transcription Stomach Mucosa stomach
16 chr11:15992600-16006800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr11:15992800-15997000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr11:15992800-15997400 Weak transcription Osteobl bone
19 chr11:15992800-15998000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr11:15992800-15998000 Weak transcription NHEK skin
21 chr11:15993000-15995400 Strong transcription Fetal Intestine Large intestine
22 chr11:15993000-15997200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr11:15993000-15997400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr11:15993000-15999000 Weak transcription Right Atrium heart
25 chr11:15993000-16006800 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr11:15993000-16010600 Weak transcription Pancreas Pancrea
27 chr11:15993000-16012800 Weak transcription Right Ventricle heart
28 chr11:15993200-15997400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr11:15993200-15997600 Weak transcription K562 blood
30 chr11:15993200-15997800 Weak transcription Psoas Muscle Psoas
31 chr11:15993200-16009600 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr11:15993200-16010400 Weak transcription Left Ventricle heart
33 chr11:15993600-15997600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr11:15993600-16006600 Weak transcription Fetal Intestine Small intestine
35 chr11:15993800-15995400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr11:15994000-15999600 Strong transcription Cortex derived primary cultured neurospheres brain
37 chr11:15995000-16002600 Weak transcription Pancreatic Islets Pancreatic Islet

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015