The 2.0 version of rSNPBase

Variant report

Variant rs60855295
Chromosome Location chr11:15997953-15997954
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:15990400-16011600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr11:15991600-16006600 Weak transcription Liver Liver
3 chr11:15991800-15998000 Weak transcription Aorta Aorta
4 chr11:15991800-16006800 Weak transcription Fetal Muscle Leg muscle
5 chr11:15992400-16006600 Weak transcription Duodenum Mucosa Duodenum
6 chr11:15992600-15998000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr11:15992600-16002400 Weak transcription Stomach Mucosa stomach
8 chr11:15992600-16006800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr11:15992800-15998000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr11:15992800-15998000 Weak transcription NHEK skin
11 chr11:15993000-15999000 Weak transcription Right Atrium heart
12 chr11:15993000-16006800 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr11:15993000-16010600 Weak transcription Pancreas Pancrea
14 chr11:15993000-16012800 Weak transcription Right Ventricle heart
15 chr11:15993200-16009600 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr11:15993200-16010400 Weak transcription Left Ventricle heart
17 chr11:15993600-16006600 Weak transcription Fetal Intestine Small intestine
18 chr11:15994000-15999600 Strong transcription Cortex derived primary cultured neurospheres brain
19 chr11:15995000-16002600 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr11:15995400-16006800 Weak transcription Fetal Intestine Large intestine
21 chr11:15997000-15999400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr11:15997200-15998600 Enhancers NHLF lung
23 chr11:15997200-15999000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
24 chr11:15997200-15999200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr11:15997400-15998000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
26 chr11:15997400-15998000 Enhancers Osteobl bone
27 chr11:15997400-15998800 Enhancers Placenta Amnion Placenta Amnion
28 chr11:15997400-15999400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr11:15997600-15998200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr11:15997600-15998200 Enhancers Placenta Placenta
31 chr11:15997600-15998800 Enhancers NHDF-Ad bronchial
32 chr11:15997600-15999000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr11:15997600-15999400 Enhancers K562 blood
34 chr11:15997800-15998200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr11:15997800-15998200 Weak transcription Fetal Heart heart
36 chr11:15997800-15998600 Enhancers Psoas Muscle Psoas
37 chr11:15997800-16006600 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015