Variant report

Variant rs55805949
Chromosome Location chr3:99367712-99367713
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:99358000-99369400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr3:99360000-99370200 Weak transcription Right Atrium heart
3 chr3:99362600-99368800 Enhancers Colon Smooth Muscle Colon
4 chr3:99362800-99369200 Enhancers NHLF lung
5 chr3:99363800-99367800 Enhancers HMEC breast
6 chr3:99363800-99369000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr3:99364000-99370200 Weak transcription Ovary ovary
8 chr3:99364400-99370000 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr3:99364800-99368600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr3:99365000-99370200 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr3:99365000-99370200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr3:99365000-99370400 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr3:99365000-99371600 Enhancers Breast Myoepithelial Primary Cells Breast
14 chr3:99365200-99368000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr3:99365200-99370200 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr3:99365400-99369800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr3:99365600-99369600 Weak transcription Stomach Smooth Muscle stomach
18 chr3:99365600-99369800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr3:99366000-99368200 Enhancers Rectal Smooth Muscle rectum
20 chr3:99366200-99368200 Enhancers Adipose Nuclei Adipose
21 chr3:99366400-99367800 Transcr. at gene 5' and 3' Muscle Satellite Cultured Cells --
22 chr3:99366400-99367800 Genic enhancers HSMM muscle
23 chr3:99366800-99368200 Enhancers HSMMtube muscle
24 chr3:99366800-99372600 Genic enhancers Osteobl bone
25 chr3:99367000-99367800 Genic enhancers NH-A brain
26 chr3:99367200-99367800 Genic enhancers NHEK skin
27 chr3:99367200-99368000 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr3:99367200-99370200 Genic enhancers HUVEC blood vessel
29 chr3:99367200-99370400 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr3:99367200-99370400 Weak transcription Fetal Lung lung
31 chr3:99367200-99372000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr3:99367200-99372000 Weak transcription Aorta Aorta
33 chr3:99367200-99372800 Weak transcription Stomach Mucosa stomach
34 chr3:99367200-99373400 Weak transcription Esophagus oesophagus
35 chr3:99367400-99367800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr3:99367400-99367800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr3:99367400-99367800 Enhancers Fetal Stomach stomach
38 chr3:99367400-99367800 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr3:99367400-99368000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr3:99367400-99368000 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr3:99367600-99368200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr3:99367600-99368400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr3:99367600-99369000 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr3:99367600-99369200 Enhancers NHDF-Ad bronchial
45 chr3:99367600-99370400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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