Variant report

Variant rs62281824
Chromosome Location chr3:99360233-99360234
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:99354400-99362000 Active TSS Aorta Aorta
2 chr3:99355600-99360600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr3:99356000-99360400 Active TSS NHDF-Ad bronchial
4 chr3:99356000-99360600 Active TSS Stomach Smooth Muscle stomach
5 chr3:99356000-99360800 Active TSS NHLF lung
6 chr3:99357400-99361600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr3:99357600-99360400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr3:99357600-99363800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr3:99357800-99363400 Weak transcription Brain Hippocampus Middle brain
10 chr3:99358000-99363200 Weak transcription Brain Anterior Caudate brain
11 chr3:99358000-99363600 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr3:99358000-99363800 Weak transcription Ovary ovary
13 chr3:99358000-99364000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr3:99358000-99369400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr3:99358200-99362600 Weak transcription Colon Smooth Muscle Colon
16 chr3:99358200-99363600 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr3:99358800-99364200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr3:99359000-99361400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr3:99359200-99362800 Weak transcription HSMMtube muscle
20 chr3:99359200-99363000 Transcr. at gene 5' and 3' HUVEC blood vessel
21 chr3:99359400-99361400 Enhancers ES-I3 Cell Line embryonic stem cell
22 chr3:99359600-99361400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr3:99359600-99362600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr3:99359800-99360600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
25 chr3:99359800-99361600 Transcr. at gene 5' and 3' Osteobl bone
26 chr3:99359800-99363000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr3:99359800-99364800 Genic enhancers HSMM muscle
28 chr3:99360000-99360400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr3:99360000-99360400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr3:99360000-99360600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
31 chr3:99360000-99361200 Enhancers iPS-20b Cell Line embryonic stem cell
32 chr3:99360000-99363800 Weak transcription Adipose Nuclei Adipose
33 chr3:99360000-99370200 Weak transcription Right Atrium heart
34 chr3:99360200-99360400 Enhancers NH-A brain
35 chr3:99360200-99360600 Flanking Active TSS Muscle Satellite Cultured Cells --
36 chr3:99360200-99361400 Bivalent Enhancer HUES64 Cell Line embryonic stem cell
37 chr3:99360200-99362000 Weak transcription NHEK skin
38 chr3:99360200-99363200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr3:99360200-99363800 Weak transcription HMEC breast

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