Variant report

Variant	rs583452
Chromosome Location	chr11:105831348-105831349
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10791776	0.84[EUR][1000 genomes]
rs10895881	0.84[EUR][1000 genomes]
rs10895883	0.83[EUR][1000 genomes]
rs10895885	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10895888	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10895889	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10895890	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11226868	0.84[EUR][1000 genomes]
rs11226871	0.84[EUR][1000 genomes]
rs11226880	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11226881	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11226883	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11226886	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11226890	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11226891	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11226892	0.89[EUR][1000 genomes]
rs11821382	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17104835	0.82[ASN][1000 genomes]
rs1939826	0.82[ASN][1000 genomes]
rs2155022	0.85[EUR][1000 genomes]
rs2155337	0.89[EUR][1000 genomes]
rs2186589	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3758793	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3824911	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs56073265	0.84[EUR][1000 genomes]
rs7110414	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72979245	0.82[ASN][1000 genomes]
rs72979260	0.80[ASN][1000 genomes]
rs7936460	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7943336	0.82[ASN][1000 genomes]

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:105827400-105850200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr11:105829800-105832200	Weak transcription	Right Atrium	heart
3	chr11:105830400-105831400	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
4	chr11:105830400-105831600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr11:105830600-105831600	Enhancers	H1 Cell Line	embryonic stem cell
6	chr11:105830600-105831600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr11:105830600-105831600	Enhancers	H9 Cell Line	embryonic stem cell
8	chr11:105830600-105831600	Enhancers	HUES48 Cell Line	embryonic stem cell
9	chr11:105830600-105831600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
10	chr11:105830600-105831800	Enhancers	HUES64 Cell Line	embryonic stem cell
11	chr11:105830600-105831800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr11:105830800-105831400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr11:105830800-105831600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr11:105831000-105831400	Active TSS	HUES6 Cell Line	embryonic stem cell
15	chr11:105831000-105831400	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
16	chr11:105831000-105831800	Active TSS	ES-I3 Cell Line	embryonic stem cell
17	chr11:105831000-105831800	Active TSS	iPS-15b Cell Line	embryonic stem cell
18	chr11:105831000-105831800	Active TSS	K562	blood
19	chr11:105831200-105831400	Flanking Active TSS	Placenta	Placenta
20	chr11:105831200-105831800	Active TSS	ES-WA7 Cell Line	embryonic stem cell

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