Variant report

Variant	rs11226881
Chromosome Location	chr11:105835528-105835529
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 62 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:62)

rs_ID	r²[population]
rs10791776	0.82[EUR][1000 genomes]
rs10895881	0.82[EUR][1000 genomes]
rs10895883	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10895885	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10895888	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10895889	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10895890	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11226868	0.82[EUR][1000 genomes]
rs11226871	0.82[EUR][1000 genomes]
rs11226880	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11226883	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11226886	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11226887	0.88[ASN][1000 genomes]
rs11226890	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11226891	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11226892	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1147065	0.85[AFR][1000 genomes]
rs11821382	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1262357	0.89[AFR][1000 genomes]
rs1267444	0.89[AFR][1000 genomes]
rs17104835	0.95[ASN][1000 genomes]
rs1939152	0.82[ASN][1000 genomes]
rs1939826	0.95[ASN][1000 genomes]
rs2155022	0.83[EUR][1000 genomes]
rs2155337	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2155338	0.84[AFR][1000 genomes]
rs2186589	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3758790	0.88[AFR][1000 genomes]
rs3758793	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3824911	0.99[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs471396	0.89[AFR][1000 genomes]
rs505829	0.85[AFR][1000 genomes]
rs507450	0.89[AFR][1000 genomes]
rs511106	0.89[AFR][1000 genomes]
rs513947	0.87[AFR][1000 genomes]
rs534844	0.89[AFR][1000 genomes]
rs556968	0.89[AFR][1000 genomes]
rs56073265	0.82[EUR][1000 genomes]
rs561643	0.89[AFR][1000 genomes]
rs562546	0.84[AFR][1000 genomes]
rs583452	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs589574	0.85[AFR][1000 genomes]
rs592656	0.85[AFR][1000 genomes]
rs593130	0.85[AFR][1000 genomes]
rs604545	0.86[AFR][1000 genomes]
rs609235	0.84[AFR][1000 genomes]
rs609665	0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs619323	0.89[AFR][1000 genomes]
rs640988	0.85[AFR][1000 genomes]
rs654035	0.85[AFR][1000 genomes]
rs656292	0.84[AFR][1000 genomes]
rs659840	0.85[AFR][1000 genomes]
rs660278	0.85[AFR][1000 genomes]
rs665554	0.89[AFR][1000 genomes]
rs677315	0.87[AFR][1000 genomes]
rs684470	0.85[AFR][1000 genomes]
rs7110414	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7116046	0.84[AFR][1000 genomes]
rs72979245	0.95[ASN][1000 genomes]
rs72979260	0.94[ASN][1000 genomes]
rs7936460	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7943336	0.95[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:105827400-105850200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr11:105831600-105836400	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr11:105831600-105838600	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr11:105831800-105836200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr11:105831800-105836400	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr11:105832000-105836400	Weak transcription	HUES6 Cell Line	embryonic stem cell

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