Variant report

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:15943539..15950749-chr6:16127377..16131631,11	K562	blood:
2	chr6:15946829..15950495-chr6:16128387..16130943,5	MCF-7	breast:
3	chr6:15937830..15939823-chr6:15946867..15949386,2	K562	blood:
4	chr6:15946905..15948638-chr6:16127377..16129407,2	K562	blood:
5	chr6:15947011..15948948-chr6:16001414..16004179,2	K562	blood:
6	chr6:15917469..15919347-chr6:15945804..15947857,2	MCF-7	breast:
7	chr6:15943795..15948359-chr6:16128219..16131208,6	MCF-7	breast:
8	chr6:15942064..15944736-chr6:15945639..15949280,3	K562	blood:
9	chr6:15947406..15949542-chr6:15954395..15956936,3	K562	blood:

No data

Variant related genes	Relation type
ENSG00000007944	Chromatin interaction

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1074130	1.00[EUR][1000 genomes]
rs1342742	1.00[EUR][1000 genomes]
rs4712262	0.86[EUR][1000 genomes]
rs4712265	1.00[EUR][1000 genomes]
rs4716006	0.90[EUR][1000 genomes]
rs61259710	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6459419	1.00[EUR][1000 genomes]
rs6459421	1.00[EUR][1000 genomes]
rs6459429	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6904123	0.89[EUR][1000 genomes]
rs6930691	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6936104	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs707841	1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs707842	1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs742384	1.00[EUR][1000 genomes]
rs742385	0.80[ASN][1000 genomes]
rs7775142	1.00[EUR][1000 genomes]
rs808361	1.00[EUR][1000 genomes]
rs909845	1.00[EUR][1000 genomes]
rs926455	1.00[EUR][1000 genomes]
rs9370840	1.00[EUR][1000 genomes]
rs9383088	1.00[EUR][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15936400-15951200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr6:15944400-15951000	Weak transcription	Gastric	stomach
3	chr6:15945800-15948000	Enhancers	Fetal Muscle Leg	muscle
4	chr6:15946400-15949200	Weak transcription	NH-A	brain
5	chr6:15946400-15949400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr6:15946600-15949000	Weak transcription	K562	blood
7	chr6:15946600-15949200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr6:15946600-15949200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr6:15946600-15949200	Weak transcription	HUVEC	blood vessel
10	chr6:15946600-15949400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr6:15946800-15949400	Weak transcription	NHEK	skin
12	chr6:15947000-15948000	Enhancers	Skeletal Muscle Male	skeletal muscle
13	chr6:15947200-15949600	Weak transcription	Psoas Muscle	Psoas
14	chr6:15947200-15952600	Weak transcription	Right Atrium	heart
15	chr6:15947400-15949600	Weak transcription	Placenta	Placenta

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