The 2.0 version of rSNPBase

Variant report

Variant rs61832447
Chromosome Location chr1:213162467-213162468
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213148400-213165400 Weak transcription Fetal Kidney kidney
2 chr1:213150400-213163000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr1:213151600-213167800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr1:213151800-213169400 Weak transcription Colonic Mucosa Colon
5 chr1:213153400-213173000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr1:213153600-213163400 Weak transcription Primary T helper cells PMA-I stimulated --
7 chr1:213153800-213168600 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr1:213153800-213170200 Weak transcription Stomach Smooth Muscle stomach
9 chr1:213154000-213164600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr1:213154000-213165000 Weak transcription Brain Substantia Nigra brain
11 chr1:213154200-213167000 Strong transcription HUES48 Cell Line embryonic stem cell
12 chr1:213154400-213167600 Weak transcription Adipose Nuclei Adipose
13 chr1:213154400-213178200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr1:213154600-213170200 Weak transcription Brain Cingulate Gyrus brain
15 chr1:213154600-213187400 Weak transcription Rectal Smooth Muscle rectum
16 chr1:213154800-213167600 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr1:213154800-213177400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr1:213154800-213178200 Weak transcription Brain Angular Gyrus brain
19 chr1:213154800-213188000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:213154800-213188400 Weak transcription Spleen Spleen
21 chr1:213155000-213168400 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr1:213155200-213163000 Weak transcription Muscle Satellite Cultured Cells --
23 chr1:213155200-213165200 Weak transcription Primary B cells from peripheral blood blood
24 chr1:213155200-213177800 Weak transcription Right Ventricle heart
25 chr1:213155400-213163000 Weak transcription Duodenum Mucosa Duodenum
26 chr1:213155400-213163200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr1:213155400-213165400 Weak transcription Primary T cells fromperipheralblood blood
28 chr1:213155400-213166400 Strong transcription H1 Cell Line embryonic stem cell
29 chr1:213155400-213178400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr1:213155600-213162800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
31 chr1:213155600-213162800 Weak transcription Left Ventricle heart
32 chr1:213155600-213166400 Strong transcription HUES6 Cell Line embryonic stem cell
33 chr1:213155600-213168200 Weak transcription Thymus Thymus
34 chr1:213155600-213168800 Weak transcription Colon Smooth Muscle Colon
35 chr1:213155600-213169400 Weak transcription Lung lung
36 chr1:213155600-213178400 Weak transcription Gastric stomach
37 chr1:213155600-213188000 Weak transcription Aorta Aorta
38 chr1:213155600-213188000 Weak transcription Esophagus oesophagus
39 chr1:213155800-213168400 Strong transcription HUES64 Cell Line embryonic stem cell
40 chr1:213156000-213162800 Weak transcription Brain Hippocampus Middle brain
41 chr1:213156000-213168800 Weak transcription Right Atrium heart
42 chr1:213156000-213176800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr1:213156000-213177200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr1:213156200-213165000 Weak transcription Placenta Placenta
45 chr1:213156200-213165200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr1:213156200-213168200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr1:213156200-213168600 Strong transcription iPS-20b Cell Line embryonic stem cell
48 chr1:213156200-213187400 Weak transcription Fetal Brain Male brain
49 chr1:213156200-213188000 Weak transcription Pancreas Pancrea
50 chr1:213156400-213170000 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015