The 2.0 version of rSNPBase

Variant report

Variant rs61832471
Chromosome Location chr1:213408814-213408815
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213326600-213422200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
2 chr1:213340600-213424600 Weak transcription Pancreas Pancrea
3 chr1:213362200-213415400 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr1:213370800-213427600 Weak transcription Rectal Smooth Muscle rectum
5 chr1:213372600-213413800 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr1:213372800-213414000 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr1:213373000-213414200 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr1:213373000-213423000 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr1:213373200-213417000 Weak transcription Primary B cells from peripheral blood blood
10 chr1:213376800-213414200 Weak transcription Brain Anterior Caudate brain
11 chr1:213378800-213421200 Weak transcription Fetal Kidney kidney
12 chr1:213381600-213425000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr1:213387400-213414000 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr1:213388000-213414400 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr1:213388000-213424600 Weak transcription Gastric stomach
16 chr1:213388200-213414000 Weak transcription Aorta Aorta
17 chr1:213388200-213414000 Weak transcription Liver Liver
18 chr1:213388200-213414200 Weak transcription Ovary ovary
19 chr1:213388200-213417200 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr1:213388200-213426200 Weak transcription Lung lung
21 chr1:213388200-213455400 Weak transcription Placenta Placenta
22 chr1:213388400-213414000 Weak transcription Fetal Muscle Leg muscle
23 chr1:213388400-213414200 Weak transcription Primary hematopoietic stem cells blood
24 chr1:213388400-213414200 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr1:213388400-213414200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr1:213388600-213418200 Weak transcription Fetal Intestine Small intestine
27 chr1:213391200-213439200 Weak transcription Primary B cells from cord blood blood
28 chr1:213394400-213420200 Weak transcription GM12878-XiMat blood
29 chr1:213398600-213427200 Weak transcription Colon Smooth Muscle Colon
30 chr1:213399600-213418000 Weak transcription Primary neutrophils fromperipheralblood blood
31 chr1:213401200-213447400 Weak transcription Small Intestine intestine
32 chr1:213402800-213454800 Weak transcription Brain Substantia Nigra brain
33 chr1:213403000-213414400 Weak transcription Brain Cingulate Gyrus brain
34 chr1:213403200-213418000 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr1:213403400-213414000 Weak transcription Dnd41 blood
36 chr1:213403400-213414800 Weak transcription Brain Germinal Matrix brain
37 chr1:213403800-213412200 Weak transcription Esophagus oesophagus
38 chr1:213404000-213414000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:213404200-213416400 Weak transcription Fetal Thymus thymus
40 chr1:213404400-213412200 Strong transcription Monocytes-CD14+_RO01746 blood
41 chr1:213404600-213409000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
42 chr1:213404800-213414200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr1:213405200-213409800 Strong transcription K562 blood
44 chr1:213405200-213410600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr1:213405400-213409800 Weak transcription Primary T killer memory cells from peripheral blood blood
46 chr1:213405400-213423000 Weak transcription A549 lung
47 chr1:213405600-213413400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr1:213405600-213414000 Weak transcription Fetal Muscle Trunk muscle
49 chr1:213405600-213414000 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr1:213405600-213414200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015