The 2.0 version of rSNPBase

Variant report

Variant rs61832474
Chromosome Location chr1:213416796-213416797
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213326600-213422200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
2 chr1:213340600-213424600 Weak transcription Pancreas Pancrea
3 chr1:213370800-213427600 Weak transcription Rectal Smooth Muscle rectum
4 chr1:213373000-213423000 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr1:213373200-213417000 Weak transcription Primary B cells from peripheral blood blood
6 chr1:213378800-213421200 Weak transcription Fetal Kidney kidney
7 chr1:213381600-213425000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr1:213388000-213424600 Weak transcription Gastric stomach
9 chr1:213388200-213417200 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr1:213388200-213426200 Weak transcription Lung lung
11 chr1:213388200-213455400 Weak transcription Placenta Placenta
12 chr1:213388600-213418200 Weak transcription Fetal Intestine Small intestine
13 chr1:213391200-213439200 Weak transcription Primary B cells from cord blood blood
14 chr1:213394400-213420200 Weak transcription GM12878-XiMat blood
15 chr1:213398600-213427200 Weak transcription Colon Smooth Muscle Colon
16 chr1:213399600-213418000 Weak transcription Primary neutrophils fromperipheralblood blood
17 chr1:213401200-213447400 Weak transcription Small Intestine intestine
18 chr1:213402800-213454800 Weak transcription Brain Substantia Nigra brain
19 chr1:213403200-213418000 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr1:213405400-213423000 Weak transcription A549 lung
21 chr1:213405600-213418200 Weak transcription H9 Cell Line embryonic stem cell
22 chr1:213405600-213418200 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr1:213405600-213440000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr1:213405600-213454800 Weak transcription Brain Angular Gyrus brain
25 chr1:213405800-213418000 Weak transcription Fetal Lung lung
26 chr1:213405800-213423200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:213405800-213423800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr1:213405800-213436000 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr1:213405800-213457600 Weak transcription NHLF lung
30 chr1:213406000-213418200 Weak transcription H1 Cell Line embryonic stem cell
31 chr1:213406000-213418200 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr1:213406000-213450000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr1:213406200-213418200 Weak transcription HUES48 Cell Line embryonic stem cell
34 chr1:213406200-213418200 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr1:213406200-213418200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr1:213406200-213418600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr1:213406200-213421200 Weak transcription Psoas Muscle Psoas
38 chr1:213406200-213422000 Weak transcription HSMM muscle
39 chr1:213406200-213445600 Weak transcription NHDF-Ad bronchial
40 chr1:213406200-213454800 Weak transcription Muscle Satellite Cultured Cells --
41 chr1:213407400-213417200 Weak transcription Thymus Thymus
42 chr1:213408600-213418200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr1:213409800-213424200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr1:213412400-213418200 Weak transcription Fetal Heart heart
45 chr1:213412600-213452400 Weak transcription Right Ventricle heart
46 chr1:213412800-213418400 Weak transcription Fetal Brain Female brain
47 chr1:213413000-213417400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr1:213413400-213417200 Strong transcription Monocytes-CD14+_RO01746 blood
49 chr1:213413600-213418200 Weak transcription iPS-18 Cell Line embryonic stem cell
50 chr1:213413800-213417800 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015