The 2.0 version of rSNPBase

Variant report

Variant rs41307658
Chromosome Location chr1:213446604-213446605
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213388200-213455400 Weak transcription Placenta Placenta
2 chr1:213401200-213447400 Weak transcription Small Intestine intestine
3 chr1:213402800-213454800 Weak transcription Brain Substantia Nigra brain
4 chr1:213405600-213454800 Weak transcription Brain Angular Gyrus brain
5 chr1:213405800-213457600 Weak transcription NHLF lung
6 chr1:213406000-213450000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr1:213406200-213454800 Weak transcription Muscle Satellite Cultured Cells --
8 chr1:213412600-213452400 Weak transcription Right Ventricle heart
9 chr1:213415400-213450200 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr1:213415600-213447200 Weak transcription Duodenum Mucosa Duodenum
11 chr1:213415600-213451000 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr1:213415600-213453800 Weak transcription Brain Cingulate Gyrus brain
13 chr1:213417200-213453600 Weak transcription HSMMtube muscle
14 chr1:213418400-213449200 Weak transcription Fetal Lung lung
15 chr1:213425000-213447400 Weak transcription Pancreas Pancrea
16 chr1:213427000-213451400 Weak transcription Primary T cells fromperipheralblood blood
17 chr1:213431200-213450600 Weak transcription Psoas Muscle Psoas
18 chr1:213433800-213454800 Weak transcription Brain Anterior Caudate brain
19 chr1:213434400-213454800 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr1:213434400-213454800 Weak transcription H9 Cell Line embryonic stem cell
21 chr1:213434600-213449200 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr1:213434600-213453800 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr1:213434600-213453800 Weak transcription HUES6 Cell Line embryonic stem cell
24 chr1:213435200-213456200 Weak transcription Esophagus oesophagus
25 chr1:213436400-213447600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:213438600-213449600 Weak transcription Gastric stomach
27 chr1:213440000-213447000 Weak transcription Primary B cells from cord blood blood
28 chr1:213440000-213451400 Weak transcription NH-A brain
29 chr1:213440000-213469800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr1:213440400-213450800 Weak transcription Fetal Stomach stomach
31 chr1:213440600-213447200 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr1:213440600-213449400 Weak transcription Ovary ovary
33 chr1:213440600-213449800 Weak transcription Primary monocytes fromperipheralblood blood
34 chr1:213440600-213452400 Weak transcription Aorta Aorta
35 chr1:213440600-213454200 Weak transcription Fetal Muscle Leg muscle
36 chr1:213440600-213454400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr1:213440600-213454800 Weak transcription Left Ventricle heart
38 chr1:213440800-213447200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:213440800-213447400 Weak transcription Primary T cells from cord blood blood
40 chr1:213440800-213447400 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr1:213440800-213449200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr1:213440800-213449800 Weak transcription GM12878-XiMat blood
43 chr1:213440800-213450800 Weak transcription Fetal Intestine Small intestine
44 chr1:213440800-213451000 Weak transcription Colon Smooth Muscle Colon
45 chr1:213440800-213457600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr1:213440800-213465800 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr1:213441000-213454600 Weak transcription Fetal Muscle Trunk muscle
48 chr1:213441200-213447600 Weak transcription Fetal Brain Male brain
49 chr1:213441400-213448400 Weak transcription Primary T helper cells fromperipheralblood blood
50 chr1:213441600-213446800 Weak transcription Primary Natural Killer cells fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015