Variant report

Variant	rs1187777
Chromosome Location	chr1:213484859-213484860
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:213484717..213486725-chr1:213488348..213490500,2	K562	blood:

Extended variants
information (count: 64 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:63)

rs_ID	r²[population]
rs11120089	0.82[EUR][1000 genomes]
rs1187788	0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1187802	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1187806	0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12065249	0.82[EUR][1000 genomes]
rs12082134	0.93[EUR][1000 genomes]
rs1628854	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17742003	0.82[EUR][1000 genomes]
rs2654910	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2817985	0.93[EUR][1000 genomes]
rs2841422	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2841433	0.93[EUR][1000 genomes]
rs41307658	0.93[EUR][1000 genomes]
rs4655415	0.93[EUR][1000 genomes]
rs57140665	0.82[EUR][1000 genomes]
rs57376645	0.82[EUR][1000 genomes]
rs57670103	0.96[EUR][1000 genomes]
rs57845296	0.82[EUR][1000 genomes]
rs58865439	0.82[EUR][1000 genomes]
rs60194877	0.82[EUR][1000 genomes]
rs60727621	0.93[EUR][1000 genomes]
rs61832461	0.93[EUR][1000 genomes]
rs61832463	0.93[EUR][1000 genomes]
rs61832465	0.85[EUR][1000 genomes]
rs61832467	0.93[EUR][1000 genomes]
rs61832468	0.93[EUR][1000 genomes]
rs61832475	0.93[EUR][1000 genomes]
rs61832476	0.93[EUR][1000 genomes]
rs61832498	0.93[EUR][1000 genomes]
rs61832499	0.93[EUR][1000 genomes]
rs61832501	0.93[EUR][1000 genomes]
rs61832502	0.89[EUR][1000 genomes]
rs61832503	0.93[EUR][1000 genomes]
rs61832508	0.96[EUR][1000 genomes]
rs61832509	0.96[EUR][1000 genomes]
rs61832510	0.96[EUR][1000 genomes]
rs61832511	0.96[EUR][1000 genomes]
rs61832513	0.93[EUR][1000 genomes]
rs61832528	0.93[EUR][1000 genomes]
rs61832529	0.96[EUR][1000 genomes]
rs61834089	0.82[EUR][1000 genomes]
rs61834091	0.82[EUR][1000 genomes]
rs61834093	0.82[EUR][1000 genomes]
rs61834094	0.82[EUR][1000 genomes]
rs61834096	0.82[EUR][1000 genomes]
rs61834099	0.82[EUR][1000 genomes]
rs61834103	0.82[EUR][1000 genomes]
rs61834104	0.82[EUR][1000 genomes]
rs61834105	0.82[EUR][1000 genomes]
rs61834109	0.82[EUR][1000 genomes]
rs61834110	0.82[EUR][1000 genomes]
rs61834116	0.82[EUR][1000 genomes]
rs61834117	0.82[EUR][1000 genomes]
rs61834118	0.82[EUR][1000 genomes]
rs61834119	0.82[EUR][1000 genomes]
rs61834123	0.85[EUR][1000 genomes]
rs61834126	0.93[EUR][1000 genomes]
rs61834136	0.93[EUR][1000 genomes]
rs61834137	0.93[EUR][1000 genomes]
rs61834138	0.93[EUR][1000 genomes]
rs61834141	0.93[EUR][1000 genomes]
rs61834142	0.93[EUR][1000 genomes]
rs9429904	0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3392967	chr1:213271844-213490132	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:213474800-213487400	Weak transcription	Right Atrium	heart

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