The 2.0 version of rSNPBase

Variant report

Variant rs12065249
Chromosome Location chr1:213247854-213247855
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213225200-213253400 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr1:213225200-213254400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:213225400-213254000 Weak transcription Aorta Aorta
4 chr1:213225400-213254000 Weak transcription Left Ventricle heart
5 chr1:213225400-213256600 Weak transcription Ovary ovary
6 chr1:213225800-213252800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr1:213225800-213254000 Weak transcription Primary T cells from cord blood blood
8 chr1:213226000-213254000 Weak transcription Fetal Muscle Leg muscle
9 chr1:213226200-213252800 Weak transcription Fetal Stomach stomach
10 chr1:213227000-213254000 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr1:213228000-213254200 Weak transcription Brain Hippocampus Middle brain
12 chr1:213228800-213263200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr1:213229400-213254200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr1:213229400-213283400 Weak transcription Hela-S3 cervix
15 chr1:213231600-213254000 Weak transcription Fetal Adrenal Gland Adrenal Gland
16 chr1:213232800-213254200 Weak transcription HepG2 liver
17 chr1:213233000-213262600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr1:213234400-213252800 Weak transcription Fetal Intestine Small intestine
19 chr1:213234800-213261000 Weak transcription Stomach Mucosa stomach
20 chr1:213235000-213254200 Weak transcription Primary B cells from cord blood blood
21 chr1:213237400-213252800 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr1:213239200-213254400 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr1:213240000-213254000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr1:213240200-213272600 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr1:213240400-213254400 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr1:213240400-213261600 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr1:213240400-213274600 Weak transcription ES-WA7 Cell Line embryonic stem cell
28 chr1:213240600-213261200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr1:213241000-213259400 Weak transcription Brain Anterior Caudate brain
30 chr1:213241200-213261000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr1:213241400-213254200 Weak transcription Right Ventricle heart
32 chr1:213243000-213259800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr1:213243600-213253200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr1:213243600-213254000 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr1:213243800-213253600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr1:213243800-213262600 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr1:213244000-213251600 Weak transcription Colon Smooth Muscle Colon
38 chr1:213244000-213252800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr1:213244000-213253400 Weak transcription Fetal Lung lung
40 chr1:213244000-213253600 Weak transcription Adipose Nuclei Adipose
41 chr1:213244000-213254000 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr1:213244000-213254000 Weak transcription Muscle Satellite Cultured Cells --
43 chr1:213244000-213254000 Weak transcription Brain Cingulate Gyrus brain
44 chr1:213244000-213254000 Weak transcription HSMMtube muscle
45 chr1:213244000-213254400 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr1:213244000-213258400 Weak transcription Psoas Muscle Psoas
47 chr1:213244200-213252600 Weak transcription Fetal Intestine Large intestine
48 chr1:213244200-213252800 Weak transcription Duodenum Mucosa Duodenum
49 chr1:213244200-213253800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr1:213244200-213254000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015