The 2.0 version of rSNPBase

Variant report

Variant rs60727621
Chromosome Location chr1:213346924-213346925
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213284600-213349800 Weak transcription Primary T cells fromperipheralblood blood
2 chr1:213301000-213371000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr1:213301000-213374800 Weak transcription HSMM muscle
4 chr1:213302600-213358200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr1:213310000-213370400 Weak transcription Duodenum Mucosa Duodenum
6 chr1:213317400-213349600 Weak transcription Left Ventricle heart
7 chr1:213317800-213351600 Weak transcription Fetal Kidney kidney
8 chr1:213323000-213349600 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr1:213325200-213359600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr1:213325600-213353400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr1:213326600-213422200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr1:213327000-213351000 Weak transcription Brain Hippocampus Middle brain
13 chr1:213327800-213352800 Weak transcription Esophagus oesophagus
14 chr1:213328000-213358200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr1:213328200-213387200 Weak transcription Spleen Spleen
16 chr1:213328400-213353400 Weak transcription Primary hematopoietic stem cells blood
17 chr1:213328600-213360200 Weak transcription K562 blood
18 chr1:213329000-213351200 Weak transcription Fetal Intestine Small intestine
19 chr1:213329000-213351200 Weak transcription Fetal Stomach stomach
20 chr1:213330200-213352000 Weak transcription Fetal Intestine Large intestine
21 chr1:213330600-213357200 Weak transcription Dnd41 blood
22 chr1:213332800-213349600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr1:213333000-213359800 Weak transcription Fetal Lung lung
24 chr1:213334000-213349800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr1:213336600-213355800 Weak transcription NH-A brain
26 chr1:213336600-213357400 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr1:213336800-213361200 Weak transcription NHDF-Ad bronchial
28 chr1:213337200-213349600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr1:213337400-213359800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr1:213337800-213349800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:213337800-213374400 Weak transcription Muscle Satellite Cultured Cells --
32 chr1:213338200-213360200 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr1:213338400-213360200 Weak transcription Small Intestine intestine
34 chr1:213339800-213349800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr1:213340200-213359600 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr1:213340400-213349600 Weak transcription Colon Smooth Muscle Colon
37 chr1:213340400-213349800 Weak transcription Brain Inferior Temporal Lobe brain
38 chr1:213340400-213349800 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr1:213340600-213353800 Weak transcription Brain Angular Gyrus brain
40 chr1:213340600-213358600 Weak transcription Psoas Muscle Psoas
41 chr1:213340600-213359800 Weak transcription Right Ventricle heart
42 chr1:213340600-213424600 Weak transcription Pancreas Pancrea
43 chr1:213340800-213348600 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr1:213340800-213360200 Weak transcription Aorta Aorta
45 chr1:213341400-213358200 Weak transcription Primary T regulatory cells fromperipheralblood blood
46 chr1:213342200-213349800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr1:213342600-213353400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr1:213343600-213359600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr1:213343800-213349600 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr1:213343800-213349800 Weak transcription HepG2 liver

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Last update: Aug 31, 2015