The 2.0 version of rSNPBase

Variant report

Variant rs61834111
Chromosome Location chr1:213308483-213308484
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213261600-213309200 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr1:213261600-213327400 Weak transcription Aorta Aorta
3 chr1:213269600-213311800 Weak transcription Primary B cells from cord blood blood
4 chr1:213271200-213309200 Weak transcription Adipose Nuclei Adipose
5 chr1:213271600-213310200 Weak transcription Fetal Muscle Trunk muscle
6 chr1:213281200-213309000 Weak transcription Primary monocytes fromperipheralblood blood
7 chr1:213281200-213309400 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr1:213281200-213320400 Weak transcription Primary T cells from cord blood blood
9 chr1:213281400-213311000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr1:213284200-213317200 Weak transcription Left Ventricle heart
11 chr1:213284600-213309400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr1:213284600-213349800 Weak transcription Primary T cells fromperipheralblood blood
13 chr1:213285400-213317200 Weak transcription Fetal Kidney kidney
14 chr1:213292400-213317400 Weak transcription Primary hematopoietic stem cells blood
15 chr1:213294000-213310000 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr1:213294200-213321400 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr1:213297400-213320400 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr1:213297600-213309600 Weak transcription Fetal Intestine Large intestine
19 chr1:213297600-213313600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr1:213297800-213309200 Weak transcription Fetal Heart heart
21 chr1:213297800-213309400 Weak transcription Fetal Intestine Small intestine
22 chr1:213297800-213309600 Weak transcription Gastric stomach
23 chr1:213297800-213310600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:213298200-213309400 Weak transcription Psoas Muscle Psoas
25 chr1:213301000-213371000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:213301000-213374800 Weak transcription HSMM muscle
27 chr1:213301200-213309200 Weak transcription K562 blood
28 chr1:213301200-213311800 Weak transcription Fetal Lung lung
29 chr1:213301400-213311800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr1:213301800-213313000 Weak transcription Fetal Muscle Leg muscle
31 chr1:213302600-213358200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr1:213302800-213317800 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr1:213303800-213309200 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr1:213306000-213309200 Weak transcription HepG2 liver
35 chr1:213306000-213311200 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr1:213306200-213309000 Weak transcription NH-A brain
37 chr1:213306200-213309400 Weak transcription HSMMtube muscle
38 chr1:213306200-213331600 Weak transcription Brain Cingulate Gyrus brain
39 chr1:213306600-213323400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:213306800-213309400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr1:213307000-213309000 Weak transcription Muscle Satellite Cultured Cells --
42 chr1:213307200-213319200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr1:213307600-213309800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr1:213308000-213309600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr1:213308000-213309600 Enhancers Brain Angular Gyrus brain
46 chr1:213308000-213309800 Enhancers Brain Substantia Nigra brain
47 chr1:213308000-213310000 Enhancers Brain Inferior Temporal Lobe brain
48 chr1:213308200-213309600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr1:213308200-213309800 Enhancers ES-I3 Cell Line embryonic stem cell
50 chr1:213308200-213309800 Enhancers HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015