The 2.0 version of rSNPBase

Variant report

Variant rs61834102
Chromosome Location chr1:213274144-213274145
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213229400-213283400 Weak transcription Hela-S3 cervix
2 chr1:213240400-213274600 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:213244200-213296200 Weak transcription NHDF-Ad bronchial
4 chr1:213246800-213283800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr1:213251200-213293000 Weak transcription NH-A brain
6 chr1:213252600-213297200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr1:213253200-213275600 Weak transcription Colon Smooth Muscle Colon
8 chr1:213253200-213277600 Weak transcription Gastric stomach
9 chr1:213254800-213297400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr1:213255200-213279400 Weak transcription Rectal Smooth Muscle rectum
11 chr1:213256800-213284000 Weak transcription Primary T cells fromperipheralblood blood
12 chr1:213258400-213280600 Weak transcription A549 lung
13 chr1:213258600-213277400 Weak transcription Psoas Muscle Psoas
14 chr1:213258800-213284200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:213259800-213284000 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr1:213261400-213280800 Weak transcription Primary T cells from cord blood blood
17 chr1:213261400-213280800 Weak transcription Stomach Mucosa stomach
18 chr1:213261400-213284000 Weak transcription Duodenum Mucosa Duodenum
19 chr1:213261600-213276800 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr1:213261600-213280000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr1:213261600-213280400 Weak transcription K562 blood
22 chr1:213261600-213281200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr1:213261600-213283800 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr1:213261600-213283800 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr1:213261600-213283800 Weak transcription HSMMtube muscle
26 chr1:213261600-213284000 Weak transcription Pancreas Pancrea
27 chr1:213261600-213284000 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr1:213261600-213293000 Weak transcription NHLF lung
29 chr1:213261600-213296000 Weak transcription Lung lung
30 chr1:213261600-213309200 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr1:213261600-213327400 Weak transcription Aorta Aorta
32 chr1:213261800-213284000 Weak transcription Left Ventricle heart
33 chr1:213261800-213285200 Weak transcription Stomach Smooth Muscle stomach
34 chr1:213262000-213277800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr1:213262200-213284400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr1:213262600-213280600 Weak transcription Osteobl bone
37 chr1:213262600-213284400 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr1:213263200-213284000 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr1:213268200-213281600 Weak transcription HepG2 liver
40 chr1:213268400-213284400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr1:213268600-213284400 Weak transcription Brain Angular Gyrus brain
42 chr1:213268800-213282200 Weak transcription Brain Anterior Caudate brain
43 chr1:213269200-213278200 Weak transcription Brain Cingulate Gyrus brain
44 chr1:213269200-213293000 Weak transcription Muscle Satellite Cultured Cells --
45 chr1:213269200-213296200 Weak transcription Brain Hippocampus Middle brain
46 chr1:213269400-213275400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr1:213269400-213284000 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr1:213269400-213308400 Weak transcription Ovary ovary
49 chr1:213269600-213280600 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr1:213269600-213311800 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015