Variant report

Variant	rs7106201
Chromosome Location	chr11:15594304-15594305
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:15593846..15595454-chr11:15598366..15601306,2	K562	blood:

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:47)

rs_ID	r²[population]
rs1010653	0.93[ASN][1000 genomes]
rs10766257	0.90[CEU][hapmap];0.83[EUR][1000 genomes]
rs10766258	0.84[EUR][1000 genomes]
rs10766267	0.96[CEU][hapmap];0.89[YRI][hapmap];0.87[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs10766268	0.94[EUR][1000 genomes]
rs10766269	0.93[AFR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10766271	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10832446	0.84[EUR][1000 genomes]
rs10832452	0.83[EUR][1000 genomes]
rs10832466	0.94[EUR][1000 genomes]
rs10832471	0.95[EUR][1000 genomes]
rs10832472	0.88[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs10832474	0.96[CEU][hapmap];0.82[CHB][hapmap];0.89[YRI][hapmap];0.81[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs10832480	0.81[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs10832481	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11023593	0.89[EUR][1000 genomes]
rs11023595	0.84[EUR][1000 genomes]
rs11023596	0.84[EUR][1000 genomes]
rs11023597	0.84[EUR][1000 genomes]
rs11023598	0.84[EUR][1000 genomes]
rs11023600	0.82[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs11023609	0.94[EUR][1000 genomes]
rs11023612	0.81[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs11023644	0.80[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs11023650	0.94[ASN][1000 genomes]
rs12270000	0.89[EUR][1000 genomes]
rs12272473	0.86[AFR][1000 genomes];0.98[EUR][1000 genomes]
rs12284635	0.81[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs1552305	0.88[ASN][1000 genomes]
rs1880393	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1880395	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2351044	0.81[ASN][1000 genomes]
rs2351046	0.96[AFR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2351050	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2351057	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4032487	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4129900	0.84[EUR][1000 genomes]
rs4756814	0.94[ASN][1000 genomes]
rs6486251	0.86[EUR][1000 genomes]
rs7103393	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7106594	0.80[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs7117096	0.81[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs7118895	0.83[AFR][1000 genomes]
rs7121567	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs729416	0.94[ASN][1000 genomes]
rs7927872	0.89[EUR][1000 genomes]
rs7934042	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1050475	chr11:15584061-15620602	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:15585200-15610600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr11:15588200-15606000	Weak transcription	Left Ventricle	heart
3	chr11:15591800-15595600	Weak transcription	Psoas Muscle	Psoas
4	chr11:15592000-15595400	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr11:15592400-15601200	Weak transcription	Right Atrium	heart
6	chr11:15592800-15596000	Weak transcription	Primary neutrophils fromperipheralblood	blood

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