The 2.0 version of rSNPBase

Variant report

Variant rs72688483
Chromosome Location chr1:46149209-46149210
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46125200-46151000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:46126000-46151000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:46126400-46151000 Weak transcription Fetal Muscle Trunk muscle
4 chr1:46126600-46150600 Weak transcription Placenta Placenta
5 chr1:46134200-46151000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:46136000-46150000 Enhancers Primary T helper cells PMA-I stimulated --
7 chr1:46140600-46150200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
8 chr1:46140800-46149800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr1:46140800-46149800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr1:46141200-46150200 Enhancers Primary T helper cells fromperipheralblood blood
11 chr1:46142400-46150400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
12 chr1:46142600-46150000 Enhancers Adipose Nuclei Adipose
13 chr1:46142800-46149400 Enhancers Liver Liver
14 chr1:46142800-46150800 Enhancers Primary T helper 17 cells PMA-I stimulated --
15 chr1:46143000-46150400 Enhancers Primary T helper naive cells fromperipheralblood blood
16 chr1:46143200-46149400 Weak transcription Spleen Spleen
17 chr1:46143400-46149600 Enhancers Rectal Mucosa Donor 31 rectum
18 chr1:46143400-46150600 Enhancers Primary T helper naive cells from peripheral blood blood
19 chr1:46143400-46150600 Enhancers Primary T killer memory cells from peripheral blood blood
20 chr1:46143800-46151000 Weak transcription H9 Cell Line embryonic stem cell
21 chr1:46144200-46150400 Enhancers Primary B cells from cord blood blood
22 chr1:46144200-46150800 Enhancers Primary T killer naive cells fromperipheralblood blood
23 chr1:46144400-46150000 Weak transcription Fetal Brain Female brain
24 chr1:46144600-46150000 Enhancers Primary hematopoietic stem cells short term culture blood
25 chr1:46144800-46150000 Enhancers HepG2 liver
26 chr1:46144800-46151000 Enhancers Primary B cells from peripheral blood blood
27 chr1:46145000-46149600 Weak transcription Brain Germinal Matrix brain
28 chr1:46145200-46149400 Weak transcription Aorta Aorta
29 chr1:46145200-46150000 Enhancers Skeletal Muscle Male skeletal muscle
30 chr1:46145200-46150200 Weak transcription Right Atrium heart
31 chr1:46145200-46150200 Weak transcription NH-A brain
32 chr1:46145400-46150000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr1:46145400-46150000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr1:46145400-46150200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr1:46145600-46150000 Weak transcription NHDF-Ad bronchial
36 chr1:46146000-46149400 Enhancers Duodenum Mucosa Duodenum
37 chr1:46146000-46150400 Enhancers Colon Smooth Muscle Colon
38 chr1:46146200-46150600 Weak transcription Brain Inferior Temporal Lobe brain
39 chr1:46146200-46150800 Weak transcription Fetal Muscle Leg muscle
40 chr1:46146200-46151000 Weak transcription Small Intestine intestine
41 chr1:46146600-46150000 Enhancers Primary T cells from cord blood blood
42 chr1:46146600-46150000 Weak transcription Muscle Satellite Cultured Cells --
43 chr1:46146600-46150000 Weak transcription HMEC breast
44 chr1:46146800-46150000 Enhancers Dnd41 blood
45 chr1:46146800-46150000 Enhancers Monocytes-CD14+_RO01746 blood
46 chr1:46147000-46150000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr1:46147200-46149600 Weak transcription Rectal Smooth Muscle rectum
48 chr1:46147400-46149800 Enhancers Breast Myoepithelial Primary Cells Breast
49 chr1:46147400-46150000 Weak transcription Osteobl bone
50 chr1:46147600-46149400 Enhancers Rectal Mucosa Donor 29 rectum

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015