The 2.0 version of rSNPBase

Variant report

Variant rs28438704
Chromosome Location chr1:46170544-46170545
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46154600-46177200 Weak transcription Aorta Aorta
2 chr1:46154600-46180000 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr1:46154600-46188600 Weak transcription Fetal Heart heart
4 chr1:46154600-46206600 Weak transcription Brain Substantia Nigra brain
5 chr1:46154800-46186000 Weak transcription Psoas Muscle Psoas
6 chr1:46154800-46192600 Weak transcription Pancreas Pancrea
7 chr1:46155000-46185200 Weak transcription Colonic Mucosa Colon
8 chr1:46155000-46187000 Weak transcription NHLF lung
9 chr1:46155000-46215800 Weak transcription Small Intestine intestine
10 chr1:46155200-46177600 Weak transcription Fetal Brain Male brain
11 chr1:46155200-46178800 Weak transcription Stomach Mucosa stomach
12 chr1:46155600-46204600 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr1:46155800-46188400 Weak transcription Hela-S3 cervix
14 chr1:46155800-46215600 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr1:46156000-46177200 Weak transcription Lung lung
16 chr1:46156200-46170600 Weak transcription HepG2 liver
17 chr1:46156800-46203800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr1:46157400-46173600 Weak transcription Muscle Satellite Cultured Cells --
19 chr1:46157400-46209800 Weak transcription Brain Cingulate Gyrus brain
20 chr1:46159400-46174200 Weak transcription Esophagus oesophagus
21 chr1:46159400-46176800 Weak transcription Gastric stomach
22 chr1:46159800-46173400 Weak transcription A549 lung
23 chr1:46159800-46186800 Weak transcription HSMMtube muscle
24 chr1:46159800-46188000 Weak transcription Right Ventricle heart
25 chr1:46159800-46194800 Weak transcription Brain Inferior Temporal Lobe brain
26 chr1:46160400-46180000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr1:46160400-46186800 Weak transcription NH-A brain
28 chr1:46160600-46174400 Weak transcription Brain Angular Gyrus brain
29 chr1:46160600-46188600 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr1:46160800-46173800 Weak transcription Thymus Thymus
31 chr1:46160800-46177000 Weak transcription Fetal Kidney kidney
32 chr1:46160800-46178400 Weak transcription HUVEC blood vessel
33 chr1:46160800-46179000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr1:46160800-46215400 Weak transcription Brain Hippocampus Middle brain
35 chr1:46161000-46172000 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr1:46161000-46173400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr1:46161000-46174200 Weak transcription Fetal Lung lung
38 chr1:46161000-46177000 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr1:46161000-46196200 Weak transcription NHEK skin
40 chr1:46161200-46174400 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr1:46161200-46192800 Weak transcription Spleen Spleen
42 chr1:46161200-46196000 Weak transcription GM12878-XiMat blood
43 chr1:46161200-46206600 Weak transcription Primary T killer memory cells from peripheral blood blood
44 chr1:46161400-46174400 Weak transcription Brain Germinal Matrix brain
45 chr1:46161400-46192000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr1:46162000-46174400 Weak transcription HUES6 Cell Line embryonic stem cell
47 chr1:46162200-46192600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr1:46162600-46173200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr1:46162600-46177200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr1:46162600-46186600 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015