The 2.0 version of rSNPBase

Variant report

Variant rs6690926
Chromosome Location chr1:46134978-46134979
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46100200-46135600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:46106200-46140000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:46121000-46135400 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr1:46124400-46135000 Weak transcription A549 lung
5 chr1:46124800-46144600 Weak transcription Aorta Aorta
6 chr1:46125000-46148400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr1:46125200-46135000 Weak transcription NH-A brain
8 chr1:46125200-46151000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr1:46125400-46135800 Weak transcription Fetal Brain Male brain
10 chr1:46125400-46140000 Weak transcription NHEK skin
11 chr1:46126000-46135000 Weak transcription Right Ventricle heart
12 chr1:46126000-46137000 Weak transcription Esophagus oesophagus
13 chr1:46126000-46143000 Weak transcription Fetal Lung lung
14 chr1:46126000-46143800 Weak transcription Fetal Brain Female brain
15 chr1:46126000-46144200 Weak transcription Brain Germinal Matrix brain
16 chr1:46126000-46145000 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr1:46126000-46147200 Weak transcription Thymus Thymus
18 chr1:46126000-46149000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr1:46126000-46151000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:46126200-46138400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr1:46126200-46138800 Weak transcription Brain Hippocampus Middle brain
22 chr1:46126200-46140000 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr1:46126200-46140200 Weak transcription H9 Cell Line embryonic stem cell
24 chr1:46126200-46144800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr1:46126200-46148600 Weak transcription Fetal Stomach stomach
26 chr1:46126400-46135000 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr1:46126400-46135000 Weak transcription Rectal Smooth Muscle rectum
28 chr1:46126400-46137000 Weak transcription Small Intestine intestine
29 chr1:46126400-46139400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr1:46126400-46140000 Weak transcription Primary neutrophils fromperipheralblood blood
31 chr1:46126400-46143000 Weak transcription Primary T cells from cord blood blood
32 chr1:46126400-46144200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr1:46126400-46144800 Weak transcription Colonic Mucosa Colon
34 chr1:46126400-46144800 Weak transcription Fetal Muscle Leg muscle
35 chr1:46126400-46146600 Weak transcription Fetal Kidney kidney
36 chr1:46126400-46151000 Weak transcription Fetal Muscle Trunk muscle
37 chr1:46126600-46143000 Weak transcription Fetal Intestine Large intestine
38 chr1:46126600-46144800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr1:46126600-46150600 Weak transcription Placenta Placenta
40 chr1:46126800-46135200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr1:46126800-46137600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr1:46126800-46140200 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr1:46126800-46145000 Weak transcription HMEC breast
44 chr1:46126800-46147200 Weak transcription H1 Cell Line embryonic stem cell
45 chr1:46127000-46135600 Weak transcription HUVEC blood vessel
46 chr1:46127000-46135800 Weak transcription HSMM muscle
47 chr1:46127000-46138200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr1:46127000-46138800 Weak transcription Primary B cells from peripheral blood blood
49 chr1:46127000-46139400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr1:46127000-46139600 Weak transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015