The 2.0 version of rSNPBase

Variant report

Variant rs11211162
Chromosome Location chr1:46149858-46149859
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46125200-46151000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:46126000-46151000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:46126400-46151000 Weak transcription Fetal Muscle Trunk muscle
4 chr1:46126600-46150600 Weak transcription Placenta Placenta
5 chr1:46134200-46151000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:46136000-46150000 Enhancers Primary T helper cells PMA-I stimulated --
7 chr1:46140600-46150200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
8 chr1:46141200-46150200 Enhancers Primary T helper cells fromperipheralblood blood
9 chr1:46142400-46150400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
10 chr1:46142600-46150000 Enhancers Adipose Nuclei Adipose
11 chr1:46142800-46150800 Enhancers Primary T helper 17 cells PMA-I stimulated --
12 chr1:46143000-46150400 Enhancers Primary T helper naive cells fromperipheralblood blood
13 chr1:46143400-46150600 Enhancers Primary T helper naive cells from peripheral blood blood
14 chr1:46143400-46150600 Enhancers Primary T killer memory cells from peripheral blood blood
15 chr1:46143800-46151000 Weak transcription H9 Cell Line embryonic stem cell
16 chr1:46144200-46150400 Enhancers Primary B cells from cord blood blood
17 chr1:46144200-46150800 Enhancers Primary T killer naive cells fromperipheralblood blood
18 chr1:46144400-46150000 Weak transcription Fetal Brain Female brain
19 chr1:46144600-46150000 Enhancers Primary hematopoietic stem cells short term culture blood
20 chr1:46144800-46150000 Enhancers HepG2 liver
21 chr1:46144800-46151000 Enhancers Primary B cells from peripheral blood blood
22 chr1:46145200-46150000 Enhancers Skeletal Muscle Male skeletal muscle
23 chr1:46145200-46150200 Weak transcription Right Atrium heart
24 chr1:46145200-46150200 Weak transcription NH-A brain
25 chr1:46145400-46150000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr1:46145400-46150000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr1:46145400-46150200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:46145600-46150000 Weak transcription NHDF-Ad bronchial
29 chr1:46146000-46150400 Enhancers Colon Smooth Muscle Colon
30 chr1:46146200-46150600 Weak transcription Brain Inferior Temporal Lobe brain
31 chr1:46146200-46150800 Weak transcription Fetal Muscle Leg muscle
32 chr1:46146200-46151000 Weak transcription Small Intestine intestine
33 chr1:46146600-46150000 Enhancers Primary T cells from cord blood blood
34 chr1:46146600-46150000 Weak transcription Muscle Satellite Cultured Cells --
35 chr1:46146600-46150000 Weak transcription HMEC breast
36 chr1:46146800-46150000 Enhancers Dnd41 blood
37 chr1:46146800-46150000 Enhancers Monocytes-CD14+_RO01746 blood
38 chr1:46147000-46150000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr1:46147400-46150000 Weak transcription Osteobl bone
40 chr1:46147600-46150000 Enhancers HUES48 Cell Line embryonic stem cell
41 chr1:46147600-46150200 Weak transcription Stomach Mucosa stomach
42 chr1:46147600-46150400 Weak transcription ES-WA7 Cell Line embryonic stem cell
43 chr1:46147600-46151000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr1:46147800-46150000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr1:46147800-46150000 Enhancers Primary hematopoietic stem cells blood
46 chr1:46148000-46150600 Enhancers Cortex derived primary cultured neurospheres brain
47 chr1:46148200-46150000 Weak transcription H1 Cell Line embryonic stem cell
48 chr1:46148200-46150800 Weak transcription Brain Angular Gyrus brain
49 chr1:46148400-46150000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr1:46148400-46150000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015