The 2.0 version of rSNPBase

Variant report

Variant rs6429574
Chromosome Location chr1:46134054-46134055
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46100200-46135600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:46106200-46140000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:46121000-46135400 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr1:46124400-46135000 Weak transcription A549 lung
5 chr1:46124800-46144600 Weak transcription Aorta Aorta
6 chr1:46125000-46148400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr1:46125200-46135000 Weak transcription NH-A brain
8 chr1:46125200-46151000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr1:46125400-46135800 Weak transcription Fetal Brain Male brain
10 chr1:46125400-46140000 Weak transcription NHEK skin
11 chr1:46125600-46134800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr1:46126000-46134800 Weak transcription Stomach Smooth Muscle stomach
13 chr1:46126000-46135000 Weak transcription Right Ventricle heart
14 chr1:46126000-46137000 Weak transcription Esophagus oesophagus
15 chr1:46126000-46143000 Weak transcription Fetal Lung lung
16 chr1:46126000-46143800 Weak transcription Fetal Brain Female brain
17 chr1:46126000-46144200 Weak transcription Brain Germinal Matrix brain
18 chr1:46126000-46145000 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr1:46126000-46147200 Weak transcription Thymus Thymus
20 chr1:46126000-46149000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr1:46126000-46151000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:46126200-46134400 Weak transcription Muscle Satellite Cultured Cells --
23 chr1:46126200-46138400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr1:46126200-46138800 Weak transcription Brain Hippocampus Middle brain
25 chr1:46126200-46140000 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr1:46126200-46140200 Weak transcription H9 Cell Line embryonic stem cell
27 chr1:46126200-46144800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:46126200-46148600 Weak transcription Fetal Stomach stomach
29 chr1:46126400-46134400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr1:46126400-46134400 Weak transcription Primary T regulatory cells fromperipheralblood blood
31 chr1:46126400-46134400 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr1:46126400-46134800 Weak transcription Adipose Nuclei Adipose
33 chr1:46126400-46134800 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr1:46126400-46134800 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr1:46126400-46135000 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr1:46126400-46135000 Weak transcription Rectal Smooth Muscle rectum
37 chr1:46126400-46137000 Weak transcription Small Intestine intestine
38 chr1:46126400-46139400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:46126400-46140000 Weak transcription Primary neutrophils fromperipheralblood blood
40 chr1:46126400-46143000 Weak transcription Primary T cells from cord blood blood
41 chr1:46126400-46144200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr1:46126400-46144800 Weak transcription Colonic Mucosa Colon
43 chr1:46126400-46144800 Weak transcription Fetal Muscle Leg muscle
44 chr1:46126400-46146600 Weak transcription Fetal Kidney kidney
45 chr1:46126400-46151000 Weak transcription Fetal Muscle Trunk muscle
46 chr1:46126600-46134400 Weak transcription NHDF-Ad bronchial
47 chr1:46126600-46143000 Weak transcription Fetal Intestine Large intestine
48 chr1:46126600-46144800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr1:46126600-46150600 Weak transcription Placenta Placenta
50 chr1:46126800-46134400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015