The 2.0 version of rSNPBase

Variant report

Variant rs4586014
Chromosome Location chr1:46150443-46150444
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46125200-46151000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:46126000-46151000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:46126400-46151000 Weak transcription Fetal Muscle Trunk muscle
4 chr1:46126600-46150600 Weak transcription Placenta Placenta
5 chr1:46134200-46151000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:46142800-46150800 Enhancers Primary T helper 17 cells PMA-I stimulated --
7 chr1:46143400-46150600 Enhancers Primary T helper naive cells from peripheral blood blood
8 chr1:46143400-46150600 Enhancers Primary T killer memory cells from peripheral blood blood
9 chr1:46143800-46151000 Weak transcription H9 Cell Line embryonic stem cell
10 chr1:46144200-46150800 Enhancers Primary T killer naive cells fromperipheralblood blood
11 chr1:46144800-46151000 Enhancers Primary B cells from peripheral blood blood
12 chr1:46146200-46150600 Weak transcription Brain Inferior Temporal Lobe brain
13 chr1:46146200-46150800 Weak transcription Fetal Muscle Leg muscle
14 chr1:46146200-46151000 Weak transcription Small Intestine intestine
15 chr1:46147600-46151000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr1:46148000-46150600 Enhancers Cortex derived primary cultured neurospheres brain
17 chr1:46148200-46150800 Weak transcription Brain Angular Gyrus brain
18 chr1:46148400-46150600 Enhancers Brain Cingulate Gyrus brain
19 chr1:46148400-46151000 Enhancers Primary neutrophils fromperipheralblood blood
20 chr1:46148600-46150600 Enhancers Colonic Mucosa Colon
21 chr1:46148600-46150600 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr1:46148600-46150800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
23 chr1:46148800-46150800 Weak transcription HSMM muscle
24 chr1:46148800-46155000 Active TSS HUES6 Cell Line embryonic stem cell
25 chr1:46149200-46151000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr1:46149200-46151000 Enhancers Primary mononuclear cells fromperipheralblood Blood
27 chr1:46149400-46151000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr1:46149600-46150800 Weak transcription Fetal Brain Male brain
29 chr1:46149600-46151000 Weak transcription Esophagus oesophagus
30 chr1:46149600-46151200 Weak transcription Gastric stomach
31 chr1:46149600-46153000 Active TSS Fetal Intestine Small intestine
32 chr1:46149600-46153000 Active TSS Rectal Mucosa Donor 31 rectum
33 chr1:46149600-46153200 Active TSS Rectal Smooth Muscle rectum
34 chr1:46149600-46154200 Active TSS Duodenum Mucosa Duodenum
35 chr1:46149600-46154800 Active TSS Rectal Mucosa Donor 29 rectum
36 chr1:46149600-46155600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr1:46149800-46150600 Enhancers Fetal Heart heart
38 chr1:46149800-46150600 Enhancers Fetal Stomach stomach
39 chr1:46149800-46150800 Flanking Active TSS Duodenum Smooth Muscle Duodenum
40 chr1:46149800-46151000 Weak transcription Left Ventricle heart
41 chr1:46149800-46151000 Weak transcription Lung lung
42 chr1:46149800-46151000 Weak transcription Pancreas Pancrea
43 chr1:46149800-46151400 Weak transcription Spleen Spleen
44 chr1:46149800-46153200 Active TSS Fetal Intestine Large intestine
45 chr1:46149800-46155000 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr1:46150000-46150600 Flanking Active TSS Liver Liver
47 chr1:46150000-46150600 Enhancers Brain Anterior Caudate brain
48 chr1:46150000-46150800 Weak transcription Primary T cells fromperipheralblood blood
49 chr1:46150000-46150800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
50 chr1:46150000-46150800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015