Variant report

Variant	rs73075063
Chromosome Location	chr3:43377811-43377812
allele	C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs11130000	0.89[EUR][1000 genomes]
rs11706123	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11708097	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11708173	0.96[EUR][1000 genomes]
rs11709165	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11709517	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11710079	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11710107	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11710253	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11710486	0.94[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11710955	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11711651	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11711758	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11712075	0.87[EUR][1000 genomes]
rs11712894	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11713382	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11715609	0.96[EUR][1000 genomes]
rs11717449	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11719258	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13061553	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13079636	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs13082581	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13097209	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs1384434	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1482650	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1506615	0.97[EUR][1000 genomes]
rs1506616	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs17643558	0.91[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs2888312	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs34031620	0.91[EUR][1000 genomes]
rs34548104	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs34898315	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs35015014	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs35323779	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs35690908	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4564953	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6441775	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs66498110	0.87[EUR][1000 genomes]
rs67032102	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6767983	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6781290	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs73072960	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:106 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:43348400-43378800	Weak transcription	Hela-S3	cervix
2	chr3:43368400-43379200	Weak transcription	Stomach Mucosa	stomach
3	chr3:43368400-43379400	Weak transcription	Fetal Brain Male	brain
4	chr3:43369000-43378600	Weak transcription	Rectal Mucosa Donor 31	rectum
5	chr3:43369400-43379200	Weak transcription	Small Intestine	intestine
6	chr3:43372800-43379200	Weak transcription	Brain Inferior Temporal Lobe	brain
7	chr3:43373200-43379200	Weak transcription	HSMMtube	muscle
8	chr3:43373400-43393400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr3:43373800-43383400	Strong transcription	HUVEC	blood vessel
10	chr3:43374000-43383400	Strong transcription	Skeletal Muscle Female	skeletal muscle
11	chr3:43374400-43385000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr3:43374600-43379200	Strong transcription	Left Ventricle	heart
13	chr3:43375200-43378400	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr3:43375200-43381000	ZNF genes & repeats	Dnd41	blood
15	chr3:43375200-43382000	ZNF genes & repeats	Fetal Muscle Leg	muscle
16	chr3:43375400-43379000	Weak transcription	Placenta Amnion	Placenta Amnion
17	chr3:43375600-43381000	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
18	chr3:43375600-43382000	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
19	chr3:43375800-43380800	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
20	chr3:43375800-43381000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
21	chr3:43375800-43381400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr3:43375800-43382200	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
23	chr3:43375800-43382600	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
24	chr3:43376000-43380800	ZNF genes & repeats	Primary T cells from cord blood	blood
25	chr3:43376000-43381000	ZNF genes & repeats	IMR90 fetal lung fibroblasts Cell Line	lung
26	chr3:43376200-43381000	ZNF genes & repeats	Primary hematopoietic stem cells	blood
27	chr3:43376200-43381200	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr3:43376200-43382200	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr3:43376600-43378000	ZNF genes & repeats	NHEK	skin
30	chr3:43376600-43379400	Strong transcription	Osteobl	bone
31	chr3:43376600-43380600	ZNF genes & repeats	Fetal Adrenal Gland	Adrenal Gland
32	chr3:43376600-43380800	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
33	chr3:43376600-43380800	ZNF genes & repeats	Muscle Satellite Cultured Cells	--
34	chr3:43376600-43381000	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr3:43376600-43381000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
36	chr3:43376600-43381000	ZNF genes & repeats	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
37	chr3:43376600-43381000	ZNF genes & repeats	Primary T regulatory cells fromperipheralblood	blood
38	chr3:43376600-43381000	ZNF genes & repeats	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
39	chr3:43376600-43381000	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
40	chr3:43376600-43381000	ZNF genes & repeats	Fetal Muscle Trunk	muscle
41	chr3:43376600-43382000	ZNF genes & repeats	Primary B cells from cord blood	blood
42	chr3:43376600-43382000	ZNF genes & repeats	Primary B cells from peripheral blood	blood
43	chr3:43376600-43382200	ZNF genes & repeats	Pancreatic Islets	Pancreatic Islet
44	chr3:43376600-43382400	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr3:43376800-43378200	ZNF genes & repeats	Primary T helper memory cells from peripheral blood 2	blood
46	chr3:43376800-43378200	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
47	chr3:43376800-43378200	ZNF genes & repeats	Primary T helper cells fromperipheralblood	blood
48	chr3:43376800-43378200	ZNF genes & repeats	Primary T killer memory cells from peripheral blood	blood
49	chr3:43376800-43378200	ZNF genes & repeats	Brain Dorsolateral Prefrontal Cortex	brain
50	chr3:43376800-43380800	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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