The 2.0 version of rSNPBase

Variant report

Variant rs35323779
Chromosome Location chr3:43429373-43429374
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:43391600-43436000 Weak transcription Colonic Mucosa Colon
2 chr3:43408600-43431200 Weak transcription Duodenum Mucosa Duodenum
3 chr3:43408800-43429800 Weak transcription Right Ventricle heart
4 chr3:43408800-43431000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr3:43420400-43429600 Weak transcription Psoas Muscle Psoas
6 chr3:43420400-43431000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr3:43420800-43429600 Weak transcription HSMMtube muscle
8 chr3:43421200-43431400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr3:43421200-43431600 Weak transcription Brain Inferior Temporal Lobe brain
10 chr3:43421400-43430800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr3:43421400-43436200 Weak transcription Stomach Smooth Muscle stomach
12 chr3:43421400-43454800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr3:43425200-43429400 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr3:43427200-43432000 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr3:43427400-43429600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr3:43427400-43430400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr3:43427400-43430600 Enhancers Primary neutrophils fromperipheralblood blood
18 chr3:43427400-43430800 Enhancers Primary T cells from cord blood blood
19 chr3:43427400-43430800 Enhancers Primary T killer memory cells from peripheral blood blood
20 chr3:43427400-43431000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr3:43427400-43433400 Enhancers Primary T cells fromperipheralblood blood
22 chr3:43427800-43430000 Enhancers Spleen Spleen
23 chr3:43428000-43430000 Enhancers Pancreas Pancrea
24 chr3:43428200-43430200 Enhancers Fetal Muscle Leg muscle
25 chr3:43428200-43430400 Enhancers Primary T helper cells PMA-I stimulated --
26 chr3:43428200-43430800 Enhancers Primary T helper 17 cells PMA-I stimulated --
27 chr3:43428200-43433200 Enhancers Primary T helper cells fromperipheralblood blood
28 chr3:43428400-43429400 Enhancers Sigmoid Colon Sigmoid Colon
29 chr3:43428400-43430000 Enhancers Lung lung
30 chr3:43428400-43431200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr3:43428400-43436400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr3:43428400-43441800 Weak transcription Fetal Stomach stomach
33 chr3:43428600-43430800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
34 chr3:43428800-43430200 Enhancers Primary Natural Killer cells fromperipheralblood blood
35 chr3:43428800-43430400 Enhancers HUVEC blood vessel
36 chr3:43428800-43430800 Enhancers Primary T helper naive cells from peripheral blood blood
37 chr3:43428800-43430800 Enhancers Primary T helper naive cells fromperipheralblood blood
38 chr3:43428800-43432200 Enhancers Fetal Thymus thymus
39 chr3:43428800-43432600 Enhancers Thymus Thymus
40 chr3:43428800-43432800 Weak transcription ES-I3 Cell Line embryonic stem cell
41 chr3:43428800-43432800 Weak transcription H1 Cell Line embryonic stem cell
42 chr3:43428800-43447600 Weak transcription H9 Cell Line embryonic stem cell
43 chr3:43429000-43430000 Enhancers Fetal Muscle Trunk muscle
44 chr3:43429000-43430600 Enhancers Right Atrium heart
45 chr3:43429000-43431000 Enhancers Primary T killer naive cells fromperipheralblood blood
46 chr3:43429000-43432400 Enhancers Primary hematopoietic stem cells blood
47 chr3:43429200-43429400 Enhancers Left Ventricle heart
48 chr3:43429200-43429400 Enhancers Small Intestine intestine
49 chr3:43429200-43430400 Enhancers Placenta Placenta
50 chr3:43429200-43431000 Enhancers Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015