The 2.0 version of rSNPBase

Variant report

Variant rs6441775
Chromosome Location chr3:43450798-43450799
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:43421400-43454800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr3:43430000-43460200 Weak transcription Aorta Aorta
3 chr3:43432000-43450800 Weak transcription Esophagus oesophagus
4 chr3:43432000-43453600 Weak transcription Gastric stomach
5 chr3:43432000-43460200 Weak transcription Rectal Smooth Muscle rectum
6 chr3:43432000-43477800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr3:43432200-43453800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr3:43432400-43453800 Weak transcription Primary T cells from cord blood blood
9 chr3:43433400-43458800 Weak transcription Pancreas Pancrea
10 chr3:43436400-43452200 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr3:43436400-43475800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr3:43440800-43464400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr3:43441000-43453800 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr3:43442000-43450800 Weak transcription Ovary ovary
15 chr3:43442000-43455200 Weak transcription Right Ventricle heart
16 chr3:43442200-43455200 Weak transcription Fetal Stomach stomach
17 chr3:43442400-43460200 Weak transcription Fetal Muscle Leg muscle
18 chr3:43442600-43460200 Weak transcription Adipose Nuclei Adipose
19 chr3:43443000-43495600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr3:43443400-43465800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr3:43447000-43452400 Weak transcription Colon Smooth Muscle Colon
22 chr3:43447000-43465800 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr3:43447600-43451000 Strong transcription Duodenum Mucosa Duodenum
24 chr3:43447800-43452600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr3:43447800-43453000 Weak transcription H9 Cell Line embryonic stem cell
26 chr3:43447800-43460400 Weak transcription Left Ventricle heart
27 chr3:43447800-43481200 Weak transcription Lung lung
28 chr3:43448000-43453000 Weak transcription Fetal Brain Female brain
29 chr3:43448000-43453000 Weak transcription HUVEC blood vessel
30 chr3:43448200-43454600 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr3:43448200-43464800 Weak transcription Muscle Satellite Cultured Cells --
32 chr3:43448200-43464800 Weak transcription Osteobl bone
33 chr3:43448400-43451200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr3:43448400-43460200 Weak transcription HSMM muscle
35 chr3:43449000-43451000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr3:43449000-43451000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr3:43449000-43451800 Weak transcription Primary hematopoietic stem cells blood
38 chr3:43449000-43473000 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr3:43449000-43474400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr3:43449200-43451000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr3:43449200-43465600 Weak transcription HMEC breast
42 chr3:43449400-43454400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr3:43449600-43452400 Weak transcription Brain Hippocampus Middle brain
44 chr3:43449600-43455000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr3:43449600-43460000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr3:43449600-43462600 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr3:43450000-43451000 Strong transcription Fetal Intestine Small intestine
48 chr3:43450600-43451200 Enhancers Fetal Lung lung

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Last update: Aug 31, 2015