The 2.0 version of rSNPBase

Variant report

Variant rs35015014
Chromosome Location chr3:43465836-43465837
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:43432000-43477800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
2 chr3:43436400-43475800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr3:43443000-43495600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr3:43447800-43481200 Weak transcription Lung lung
5 chr3:43449000-43473000 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr3:43449000-43474400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr3:43451000-43473000 Weak transcription Duodenum Mucosa Duodenum
8 chr3:43453600-43467000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr3:43455600-43475400 Weak transcription Fetal Muscle Trunk muscle
10 chr3:43455600-43484400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr3:43455800-43473000 Weak transcription Fetal Stomach stomach
12 chr3:43455800-43473600 Weak transcription Brain Anterior Caudate brain
13 chr3:43455800-43477200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr3:43456600-43467200 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr3:43457000-43492800 Weak transcription K562 blood
16 chr3:43459000-43476000 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr3:43459800-43472800 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr3:43459800-43496400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr3:43460400-43466000 Weak transcription Fetal Intestine Small intestine
20 chr3:43460600-43466800 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr3:43460600-43473000 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr3:43460600-43476000 Weak transcription Spleen Spleen
23 chr3:43460800-43466000 Weak transcription Adipose Nuclei Adipose
24 chr3:43460800-43466400 Weak transcription Fetal Muscle Leg muscle
25 chr3:43460800-43473000 Weak transcription Aorta Aorta
26 chr3:43460800-43496400 Weak transcription HSMM muscle
27 chr3:43461000-43474800 Weak transcription Brain Hippocampus Middle brain
28 chr3:43461000-43475400 Weak transcription Fetal Lung lung
29 chr3:43461200-43466000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr3:43461200-43476000 Weak transcription HUVEC blood vessel
31 chr3:43463000-43472600 Weak transcription Primary neutrophils fromperipheralblood blood
32 chr3:43464200-43466000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr3:43464600-43466000 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr3:43464800-43467200 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr3:43465000-43467400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr3:43465000-43475200 Weak transcription HSMMtube muscle
37 chr3:43465200-43466000 Enhancers Stomach Smooth Muscle stomach
38 chr3:43465200-43475600 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr3:43465200-43476000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr3:43465200-43477400 Weak transcription NHLF lung
41 chr3:43465400-43466000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr3:43465400-43467400 Weak transcription Psoas Muscle Psoas
43 chr3:43465600-43466000 Weak transcription Right Ventricle heart
44 chr3:43465600-43467000 Weak transcription Fetal Heart heart
45 chr3:43465600-43467000 Weak transcription Left Ventricle heart
46 chr3:43465600-43467600 Weak transcription Rectal Smooth Muscle rectum
47 chr3:43465600-43474800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr3:43465600-43476200 Weak transcription NHDF-Ad bronchial
49 chr3:43465800-43466400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
50 chr3:43465800-43467200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015