The 2.0 version of rSNPBase

Variant report

Variant rs13061553
Chromosome Location chr3:43458241-43458242
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:43430000-43460200 Weak transcription Aorta Aorta
2 chr3:43432000-43460200 Weak transcription Rectal Smooth Muscle rectum
3 chr3:43432000-43477800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr3:43433400-43458800 Weak transcription Pancreas Pancrea
5 chr3:43436400-43475800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr3:43440800-43464400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr3:43442400-43460200 Weak transcription Fetal Muscle Leg muscle
8 chr3:43442600-43460200 Weak transcription Adipose Nuclei Adipose
9 chr3:43443000-43495600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr3:43443400-43465800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr3:43447000-43465800 Weak transcription Monocytes-CD14+_RO01746 blood
12 chr3:43447800-43460400 Weak transcription Left Ventricle heart
13 chr3:43447800-43481200 Weak transcription Lung lung
14 chr3:43448200-43464800 Weak transcription Muscle Satellite Cultured Cells --
15 chr3:43448200-43464800 Weak transcription Osteobl bone
16 chr3:43448400-43460200 Weak transcription HSMM muscle
17 chr3:43449000-43473000 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr3:43449000-43474400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr3:43449200-43465600 Weak transcription HMEC breast
20 chr3:43449600-43460000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr3:43449600-43462600 Weak transcription Primary neutrophils fromperipheralblood blood
22 chr3:43451000-43459400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr3:43451000-43459400 Weak transcription Fetal Intestine Small intestine
24 chr3:43451000-43460200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr3:43451000-43473000 Weak transcription Duodenum Mucosa Duodenum
26 chr3:43453600-43467000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr3:43453800-43460600 Weak transcription Brain Angular Gyrus brain
28 chr3:43454000-43460200 Weak transcription Fetal Lung lung
29 chr3:43454200-43460200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr3:43454800-43459000 Weak transcription Thymus Thymus
31 chr3:43455200-43460400 Weak transcription Right Atrium heart
32 chr3:43455600-43460400 Weak transcription Right Ventricle heart
33 chr3:43455600-43460400 Weak transcription Stomach Smooth Muscle stomach
34 chr3:43455600-43464000 Weak transcription Psoas Muscle Psoas
35 chr3:43455600-43475400 Weak transcription Fetal Muscle Trunk muscle
36 chr3:43455600-43484400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr3:43455800-43460400 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr3:43455800-43460600 Weak transcription Brain Hippocampus Middle brain
39 chr3:43455800-43465800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr3:43455800-43473000 Weak transcription Fetal Stomach stomach
41 chr3:43455800-43473600 Weak transcription Brain Anterior Caudate brain
42 chr3:43455800-43477200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr3:43456400-43459800 Weak transcription HepG2 liver
44 chr3:43456600-43459800 Weak transcription HUVEC blood vessel
45 chr3:43456600-43467200 Weak transcription ES-I3 Cell Line embryonic stem cell
46 chr3:43457000-43492800 Weak transcription K562 blood

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Last update: Aug 31, 2015