The 2.0 version of rSNPBase

Variant report

Variant rs7588728
Chromosome Location chr2:33807092-33807093
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33757200-33809800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr2:33762200-33809800 Weak transcription Aorta Aorta
3 chr2:33766800-33809800 Weak transcription Rectal Smooth Muscle rectum
4 chr2:33776000-33809800 Weak transcription Pancreas Pancrea
5 chr2:33778400-33807600 Weak transcription NH-A brain
6 chr2:33778400-33808600 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr2:33780000-33808600 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr2:33780400-33808600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
9 chr2:33780400-33809200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr2:33781200-33809800 Weak transcription Gastric stomach
11 chr2:33784000-33809800 Weak transcription Right Ventricle heart
12 chr2:33784000-33810000 Weak transcription Fetal Intestine Small intestine
13 chr2:33784200-33809800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr2:33784600-33808400 Weak transcription Fetal Muscle Leg muscle
15 chr2:33786000-33808600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr2:33786400-33808800 Weak transcription Fetal Muscle Trunk muscle
17 chr2:33788400-33808800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr2:33788600-33807400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr2:33788600-33808600 Weak transcription Psoas Muscle Psoas
20 chr2:33789400-33809400 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr2:33789600-33808600 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr2:33790800-33808600 Weak transcription Adipose Nuclei Adipose
23 chr2:33791400-33808600 Weak transcription Left Ventricle heart
24 chr2:33797600-33810000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr2:33798200-33807200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr2:33799800-33808800 Weak transcription A549 lung
27 chr2:33800800-33809800 Weak transcription NHEK skin
28 chr2:33801200-33808800 Weak transcription Liver Liver
29 chr2:33802200-33809800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr2:33802200-33823600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr2:33802400-33807400 Weak transcription H1 Cell Line embryonic stem cell
32 chr2:33802400-33809200 Weak transcription Brain Anterior Caudate brain
33 chr2:33802400-33809400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr2:33802800-33808600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr2:33802800-33809400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr2:33802800-33809600 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr2:33802800-33809800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr2:33802800-33809800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr2:33803000-33808600 Weak transcription Brain Inferior Temporal Lobe brain
40 chr2:33803000-33808600 Weak transcription Brain Substantia Nigra brain
41 chr2:33803000-33809000 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr2:33803000-33809600 Weak transcription Stomach Smooth Muscle stomach
43 chr2:33803000-33809800 Weak transcription Ovary ovary
44 chr2:33803000-33810000 Weak transcription Brain Angular Gyrus brain
45 chr2:33803200-33808200 Weak transcription Muscle Satellite Cultured Cells --
46 chr2:33803200-33808600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr2:33803200-33809000 Weak transcription Brain Cingulate Gyrus brain
48 chr2:33803400-33809800 Weak transcription Pancreatic Islets Pancreatic Islet
49 chr2:33803600-33809800 Weak transcription H9 Cell Line embryonic stem cell
50 chr2:33803800-33807400 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015