The 2.0 version of rSNPBase

Variant report

Variant rs7616072
Chromosome Location chr3:43376724-43376725
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:43332800-43377000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr3:43346000-43377000 Weak transcription K562 blood
3 chr3:43348400-43378800 Weak transcription Hela-S3 cervix
4 chr3:43361200-43377800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr3:43368200-43377000 Weak transcription Ovary ovary
6 chr3:43368200-43377200 Weak transcription Gastric stomach
7 chr3:43368200-43377600 Weak transcription Colonic Mucosa Colon
8 chr3:43368400-43379200 Weak transcription Stomach Mucosa stomach
9 chr3:43368400-43379400 Weak transcription Fetal Brain Male brain
10 chr3:43368800-43376800 Weak transcription HepG2 liver
11 chr3:43369000-43377200 Weak transcription Rectal Smooth Muscle rectum
12 chr3:43369000-43378600 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr3:43369400-43379200 Weak transcription Small Intestine intestine
14 chr3:43369600-43377200 Weak transcription Colon Smooth Muscle Colon
15 chr3:43370200-43377200 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr3:43370400-43376800 Weak transcription Brain Anterior Caudate brain
17 chr3:43370400-43376800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr3:43370400-43377000 Weak transcription Brain Hippocampus Middle brain
19 chr3:43370400-43377600 Weak transcription Right Ventricle heart
20 chr3:43370600-43376800 Weak transcription HMEC breast
21 chr3:43371200-43376800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
22 chr3:43372400-43377000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr3:43372400-43377200 Weak transcription NHLF lung
24 chr3:43372600-43377200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
25 chr3:43372800-43376800 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr3:43372800-43379200 Weak transcription Brain Inferior Temporal Lobe brain
27 chr3:43373000-43377000 Weak transcription Psoas Muscle Psoas
28 chr3:43373000-43377200 Weak transcription Brain Angular Gyrus brain
29 chr3:43373200-43376800 Strong transcription Primary T helper cells PMA-I stimulated --
30 chr3:43373200-43376800 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr3:43373200-43379200 Weak transcription HSMMtube muscle
32 chr3:43373400-43376800 Strong transcription Primary T helper cells fromperipheralblood blood
33 chr3:43373400-43393400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr3:43373600-43376800 Strong transcription Primary T helper naive cells fromperipheralblood blood
35 chr3:43373600-43377000 Strong transcription Primary T cells fromperipheralblood blood
36 chr3:43373600-43377000 Strong transcription Primary T helper naive cells from peripheral blood blood
37 chr3:43373600-43377000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
38 chr3:43373600-43377200 Strong transcription Liver Liver
39 chr3:43373800-43377000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr3:43373800-43377200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr3:43373800-43383400 Strong transcription HUVEC blood vessel
42 chr3:43374000-43376800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr3:43374000-43377000 Strong transcription Duodenum Mucosa Duodenum
44 chr3:43374000-43377200 Strong transcription Fetal Lung lung
45 chr3:43374000-43383400 Strong transcription Skeletal Muscle Female skeletal muscle
46 chr3:43374200-43377000 Strong transcription Adipose Nuclei Adipose
47 chr3:43374200-43377800 Strong transcription Rectal Mucosa Donor 29 rectum
48 chr3:43374400-43377200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
49 chr3:43374400-43385000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
50 chr3:43374600-43376800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015