Variant report

Variant	rs9755005
Chromosome Location	chr3:43398440-43398441
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 66 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:66)

rs_ID	r²[population]
rs10084663	0.84[AFR][1000 genomes]
rs11129997	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11129998	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11130003	0.97[AFR][1000 genomes]
rs1120779	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11713302	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12495394	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12497714	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12632805	1.00[AMR][1000 genomes]
rs1320157	1.00[AMR][1000 genomes]
rs1320159	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1472807	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1506618	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1996496	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2036616	0.97[AFR][1000 genomes]
rs2135510	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2372353	1.00[AMR][1000 genomes]
rs2372357	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2372358	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2372359	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2888311	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4234427	1.00[AMR][1000 genomes]
rs4234466	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4339089	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4346523	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4405884	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4420837	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4425230	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4470482	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4569634	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4618196	1.00[AMR][1000 genomes]
rs4642093	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4682673	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4682674	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4682681	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4682684	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4682688	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4682884	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4682889	1.00[AMR][1000 genomes]
rs4683365	1.00[AMR][1000 genomes]
rs4683368	1.00[AMR][1000 genomes]
rs6441771	0.97[AFR][1000 genomes]
rs6442145	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6765835	1.00[AMR][1000 genomes]
rs6766825	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6767741	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6775392	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6784075	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6791682	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6793755	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7616072	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7618790	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7620124	1.00[AMR][1000 genomes]
rs7636644	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7647197	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7648023	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7651091	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs906156	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs906157	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs906158	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs937827	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs984345	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9846341	0.97[AFR][1000 genomes]
rs9847454	0.85[AFR][1000 genomes]
rs9859465	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9872346	1.00[AMR][1000 genomes]

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:43385800-43402000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr3:43387600-43402600	Weak transcription	Right Atrium	heart
3	chr3:43389200-43400800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr3:43390600-43403600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr3:43390600-43406600	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr3:43390600-43407200	Weak transcription	Gastric	stomach
7	chr3:43390800-43402200	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr3:43390800-43405200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr3:43391400-43405400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr3:43391600-43402000	Weak transcription	HUES64 Cell Line	embryonic stem cell
11	chr3:43391600-43404200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr3:43391600-43436000	Weak transcription	Colonic Mucosa	Colon
13	chr3:43392200-43419600	Weak transcription	Rectal Smooth Muscle	rectum
14	chr3:43392800-43402200	Weak transcription	Skeletal Muscle Male	skeletal muscle
15	chr3:43393000-43402000	Weak transcription	Left Ventricle	heart
16	chr3:43393000-43405000	Weak transcription	Pancreas	Pancrea
17	chr3:43393400-43402200	Weak transcription	Skeletal Muscle Female	skeletal muscle
18	chr3:43395800-43406600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr3:43396000-43405600	Weak transcription	Primary neutrophils fromperipheralblood	blood
20	chr3:43396600-43404000	Weak transcription	Spleen	Spleen
21	chr3:43396600-43404200	Weak transcription	Fetal Stomach	stomach
22	chr3:43396800-43400600	Weak transcription	Thymus	Thymus
23	chr3:43396800-43402200	Weak transcription	HSMMtube	muscle
24	chr3:43396800-43403600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
25	chr3:43396800-43407000	Weak transcription	Aorta	Aorta
26	chr3:43396800-43407200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
27	chr3:43397000-43406400	Weak transcription	Primary hematopoietic stem cells short term culture	blood

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