The 2.0 version of rSNPBase

Variant report

Variant rs12495394
Chromosome Location chr3:43545473-43545474
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:43504800-43553400 Weak transcription Duodenum Mucosa Duodenum
2 chr3:43526000-43560800 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr3:43527200-43560200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr3:43533000-43553000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr3:43539200-43575000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr3:43539600-43558800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr3:43539800-43546400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr3:43539800-43553800 Weak transcription HSMMtube muscle
9 chr3:43540000-43546200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr3:43540000-43546600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr3:43540000-43548800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr3:43540000-43554200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr3:43540000-43554400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr3:43540000-43556600 Weak transcription Fetal Intestine Small intestine
15 chr3:43540000-43582000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr3:43540200-43550800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr3:43540200-43554000 Weak transcription Muscle Satellite Cultured Cells --
18 chr3:43540200-43559000 Weak transcription HUES6 Cell Line embryonic stem cell
19 chr3:43540200-43564600 Weak transcription NHEK skin
20 chr3:43540200-43602200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr3:43540400-43547200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr3:43540600-43560800 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr3:43540800-43554200 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr3:43540800-43559200 Weak transcription Fetal Muscle Leg muscle
25 chr3:43541200-43548600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr3:43541600-43559000 Weak transcription Adipose Nuclei Adipose
27 chr3:43541800-43558600 Weak transcription Aorta Aorta
28 chr3:43542000-43559000 Weak transcription Monocytes-CD14+_RO01746 blood
29 chr3:43542800-43588800 Weak transcription Left Ventricle heart
30 chr3:43544000-43548000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr3:43544000-43548000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr3:43544000-43548600 Weak transcription Psoas Muscle Psoas
33 chr3:43544000-43617600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr3:43544200-43554000 Weak transcription HSMM muscle
35 chr3:43544200-43558200 Weak transcription Lung lung
36 chr3:43544200-43558600 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr3:43544400-43560200 Weak transcription Primary neutrophils fromperipheralblood blood
38 chr3:43545200-43546800 Weak transcription K562 blood
39 chr3:43545200-43559200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr3:43545200-43560200 Weak transcription iPS-18 Cell Line embryonic stem cell

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Last update: Aug 31, 2015