Variant report

Variant rs7712899
Chromosome Location chr5:92908786-92908787
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:92889600-92909800 Weak transcription Ovary ovary
2 chr5:92900800-92914400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr5:92905400-92910200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr5:92905600-92908800 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
5 chr5:92905600-92908800 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
6 chr5:92905600-92909400 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
7 chr5:92905600-92909600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
8 chr5:92905600-92909600 ZNF genes & repeats Placenta Placenta
9 chr5:92905800-92909600 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
10 chr5:92906000-92909000 Bivalent Enhancer Spleen Spleen
11 chr5:92906000-92909200 Enhancers Pancreas Pancrea
12 chr5:92906000-92911200 Bivalent Enhancer Fetal Brain Male brain
13 chr5:92906400-92909000 Bivalent Enhancer Liver Liver
14 chr5:92906600-92909000 Bivalent Enhancer Primary B cells from peripheral blood blood
15 chr5:92906800-92908800 Bivalent Enhancer Primary T cells fromperipheralblood blood
16 chr5:92906800-92909000 Bivalent Enhancer Fetal Thymus thymus
17 chr5:92907000-92909000 Bivalent Enhancer Breast Myoepithelial Primary Cells Breast
18 chr5:92907000-92909400 Flanking Bivalent TSS/Enh iPS-18 Cell Line embryonic stem cell
19 chr5:92907200-92908800 Bivalent Enhancer Fetal Intestine Small intestine
20 chr5:92907400-92909000 Flanking Active TSS Adipose Nuclei Adipose
21 chr5:92907600-92908800 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr5:92907600-92908800 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin01 Skin
23 chr5:92907600-92909000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr5:92907600-92909000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr5:92907600-92909000 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
26 chr5:92907600-92909200 Flanking Bivalent TSS/Enh H1 Cell Line embryonic stem cell
27 chr5:92907600-92909200 Bivalent Enhancer Primary hematopoietic stem cells short term culture blood
28 chr5:92907600-92909200 Active TSS Fetal Kidney kidney
29 chr5:92907600-92909200 Flanking Active TSS HMEC breast
30 chr5:92907600-92909400 Flanking Bivalent TSS/Enh Fetal Brain Female brain
31 chr5:92907600-92909600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
32 chr5:92907800-92908800 Bivalent/Poised TSS Psoas Muscle Psoas
33 chr5:92907800-92908800 Bivalent/Poised TSS HepG2 liver
34 chr5:92907800-92909000 Flanking Bivalent TSS/Enh H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr5:92907800-92909000 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
36 chr5:92907800-92909000 Bivalent Enhancer Primary hematopoietic stem cells blood
37 chr5:92907800-92909000 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr5:92907800-92909000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
39 chr5:92907800-92909000 Bivalent Enhancer Lung lung
40 chr5:92907800-92909000 Flanking Active TSS HUVEC blood vessel
41 chr5:92907800-92909000 Active TSS Osteobl bone
42 chr5:92907800-92909200 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
43 chr5:92907800-92909200 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
44 chr5:92907800-92909400 Flanking Bivalent TSS/Enh Fetal Stomach stomach
45 chr5:92907800-92910800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
46 chr5:92908000-92908800 Bivalent Enhancer Esophagus oesophagus
47 chr5:92908000-92908800 Active TSS Right Atrium heart
48 chr5:92908000-92909000 Bivalent Enhancer H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr5:92908000-92909000 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr5:92908000-92909000 Bivalent/Poised TSS Brain Anterior Caudate brain

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