Variant report

Variant	rs8181116
Chromosome Location	chr9:85844077-85844078
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:85834180..85837170-chr9:85842526..85845762,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000229109	Chromatin interaction

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10114830	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10117817	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10122684	0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10122802	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10735561	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10746698	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10746699	0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10780578	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10780579	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10780580	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10780582	0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1323767	0.83[ASN][1000 genomes]
rs1323768	0.83[ASN][1000 genomes]
rs1535747	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1535748	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1830771	0.83[ASN][1000 genomes]
rs1924239	0.83[ASN][1000 genomes]
rs2209191	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4366157	0.82[AMR][1000 genomes]
rs4390021	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4877741	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4877742	0.91[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4877744	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4877746	0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4877750	0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6559715	0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7028221	0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7030390	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7043458	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs744959	0.83[ASN][1000 genomes]
rs748415	0.83[ASN][1000 genomes]
rs7848473	0.83[ASN][1000 genomes]
rs7851447	0.83[ASN][1000 genomes]
rs7851474	0.83[ASN][1000 genomes]
rs7855633	0.83[ASN][1000 genomes]
rs7866798	0.83[ASN][1000 genomes]
rs7871379	0.81[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:85843800-85844200	Enhancers	H9 Cell Line	embryonic stem cell
2	chr9:85844000-85844200	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr9:85844000-85844400	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell

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